GTEX-11ONC
|
61-70
|
Male
|
GTEX-11ONC-1626 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; 3 with up to 1 mm adventitial fat
|
Acceptable
|
|
GTEX-11ONC
|
61-70
|
Male
|
GTEX-11ONC-2126 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; ducts present, especially in 1 piece [annotated]
|
Acceptable
|
|
GTEX-11ONC
|
61-70
|
Male
|
GTEX-11ONC-2226 |
Testis
|
PAXgene |
1
|
2 pieces; reduced spermatogenesis
|
Acceptable
|
|
GTEX-11ONC
|
61-70
|
Male
|
GTEX-11ONC-2726 |
Artery - tibial
|
PAXgene |
1
|
3 pieces; prominent calcified plaques
|
Acceptable
|
|
GTEX-11ONC
|
61-70
|
Male
|
GTEX-11ONC-2926 |
Brain - cortex
|
PAXgene |
1
|
2 pieces, 1 with meninges (up to 0.77mm thick)
|
Acceptable
|
|
GTEX-11ONC
|
61-70
|
Male
|
GTEX-11ONC-3026 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces; well preserved Purkinje cells
|
Acceptable
|
|
GTEX-11P7K
|
21-40
|
Male
|
GTEX-11P7K-0126 |
Adrenal glands
|
PAXgene |
1
|
2 pieces; well trimmed except for 10-20% external stroma
|
Acceptable
|
|
GTEX-11P7K
|
21-40
|
Male
|
GTEX-11P7K-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; well dissected
|
Acceptable
|
|
GTEX-11P7K
|
21-40
|
Male
|
GTEX-11P7K-0326 |
Lung
|
PAXgene |
1
|
2 pieces; emphysema & atelectasis
|
Acceptable
|
|
GTEX-11P7K
|
21-40
|
Male
|
GTEX-11P7K-0426 |
Spleen
|
PAXgene |
1
|
2 pieces; slight congestion
|
Acceptable
|
|
GTEX-11P7K
|
21-40
|
Male
|
GTEX-11P7K-0626 |
Prostate
|
PAXgene |
1
|
2 pieces;
|
Acceptable
|
|
GTEX-11P7K
|
21-40
|
Male
|
GTEX-11P7K-1526 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; 2 without muscularis
|
Acceptable
|
|
GTEX-11P7K
|
21-40
|
Male
|
GTEX-11P7K-1626 |
Ileum
|
PAXgene |
1
|
5 pieces; abundant lymphoid tissue [annotated]; well dissected, well preserved
|
Acceptable
|
|
GTEX-11P7K
|
21-40
|
Male
|
GTEX-11P7K-1726 |
Stomach
|
PAXgene |
1
|
6 pieces; dilated deep glands (chief cell degeneration)
|
Acceptable
|
|
GTEX-11P7K
|
21-40
|
Male
|
GTEX-11P7K-1826 |
Colon, sigmoid
|
PAXgene |
1
|
5 pieces
|
Acceptable
|
|
GTEX-11P81
|
21-40
|
Female
|
GTEX-11P81-0126 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, one is ~50% skeletal muscle, fat and fibrous tissue
|
Acceptable
|
|
GTEX-11P81
|
21-40
|
Female
|
GTEX-11P81-0226 |
Lung
|
PAXgene |
1
|
2 pieces, hemosiderin-laden macrophages, some interstitial fibrosis and hypertrophy of mucin-secreting cells
|
Acceptable
|
|
GTEX-11P81
|
21-40
|
Female
|
GTEX-11P81-0326 |
Aorta
|
PAXgene |
1
|
6 pieces, some attached adventitia/fat
|
Acceptable
|
|
GTEX-11P81
|
21-40
|
Female
|
GTEX-11P81-0726 |
Omentum
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
|
GTEX-11P81
|
21-40
|
Female
|
GTEX-11P81-0926 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, well trimmed
|
Acceptable
|
|
GTEX-11P81
|
21-40
|
Female
|
GTEX-11P81-1026 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, small focus of squamous mucosa, may not be present in block
|
Acceptable
|
|
GTEX-11P81
|
21-40
|
Female
|
GTEX-11P81-1126 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, each containing muscularis and varying amounts of mucosa
|
Acceptable
|
|
GTEX-11P81
|
21-40
|
Female
|
GTEX-11P81-1326 |
Spleen
|
PAXgene |
1
|
2 pieces, congested
|
Acceptable
|
|
GTEX-11P81
|
21-40
|
Female
|
GTEX-11P81-1426 |
Colon, sigmoid
|
PAXgene |
1
|
7 pieces, predominantly muscularis (target) with few strips of mucosa (not target)
|
Acceptable
|
|
GTEX-11P81
|
21-40
|
Female
|
GTEX-11P81-1726 |
Pancreas
|
PAXgene |
1
|
2 pieces, acute pancreatitis
|
Acceptable
|
|