GTEX-1KAFJ
|
51-60
|
Male
|
GTEX-1KAFJ-1326 |
Ileum
|
PAXgene |
1
|
6 pieces; only 2 small lymphoid nodules in mucosa; full thickness of wall sampled
|
Unacceptable
|
 |
GTEX-1KANA
|
21-40
|
Male
|
GTEX-1KANA-1826 |
Ileum
|
PAXgene |
1
|
6 pieces; mucosa and submucosa, but with inconsistent lymphoid component, insufficient to warrant analysis
|
Unacceptable
|
 |
GTEX-1KANB
|
51-60
|
Male
|
GTEX-1KANB-1426 |
Ileum
|
PAXgene |
3
|
5 pieces, target lymphoid aggregates are less than 1% of tissue
|
Unacceptable
|
 |
GTEX-1KANC
|
51-60
|
Female
|
GTEX-1KANC-0626 |
Ileum
|
PAXgene |
1
|
6 pieces; several small lymphoid nodules, but muscularis comprises >90% of area; LCM
|
Unacceptable
|
 |
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-2726 |
Ileum
|
PAXgene |
1
|
6 pieces; several foci of lymphoid tissue, but mostly muscularis propria; LCM
|
Unacceptable
|
 |
GTEX-1KD5A
|
51-60
|
Male
|
GTEX-1KD5A-2426 |
Ileum
|
PAXgene |
2
|
6 pieces; moderately autolyzed muscularis
|
Unacceptable
|
 |
GTEX-1KWVE
|
21-40
|
Male
|
GTEX-1KWVE-2626 |
Ileum
|
PAXgene |
1
|
6 pieces; abundant lymphoid tissue, but muscularis present in all; LCM
|
Unacceptable
|
 |
GTEX-1KXAM
|
61-70
|
Male
|
GTEX-1KXAM-2026 |
Ileum
|
PAXgene |
1
|
6 pieces, abundant target lymphoid aggregates are ~30% of tissue, rep delineated
|
Acceptable
|
 |
GTEX-1L5NE
|
51-60
|
Male
|
GTEX-1L5NE-1826 |
Ileum
|
PAXgene |
1
|
6 pieces, target lymphoid aggregates are ~10% of tissue
|
Acceptable
|
 |
GTEX-1LB8K
|
51-60
|
Male
|
GTEX-1LB8K-2726 |
Ileum
|
PAXgene |
2
|
6 pieces; abundant lymphoid tissue in several pieces; mucosa autolyzed
|
Acceptable
|
 |
GTEX-1LBAC
|
21-40
|
Male
|
GTEX-1LBAC-1526 |
Ileum
|
PAXgene |
1
|
6 pieces; all include abundant lymphoid tissue
|
Acceptable
|
 |
GTEX-1LC46
|
21-40
|
Male
|
GTEX-1LC46-1826 |
Ileum
|
PAXgene |
2
|
6 pieces; colon/cecum, not ileum
|
Unacceptable
|
 |
GTEX-1LC47
|
61-70
|
Male
|
GTEX-1LC47-2526 |
Ileum
|
PAXgene |
3
|
6 pieces, advanced autolysis, less than 1% target lymphoid aggregates
|
Unacceptable
|
 |
GTEX-1LG7Y
|
51-60
|
Male
|
GTEX-1LG7Y-2026 |
Ileum
|
PAXgene |
3
|
6 pieces, advanced autolysis, ~10% lymphoid aggregates, delineated
|
Acceptable
|
 |
GTEX-1LG7Z
|
21-40
|
Male
|
GTEX-1LG7Z-1526 |
Ileum
|
PAXgene |
1
|
6 pieces; colon sampled, not ileum
|
Unacceptable
|
 |
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-1926 |
Ileum
|
PAXgene |
1
|
6 pieces; only focal target lymphoid tissue, few sections include muscularis (not target)
|
Unacceptable
|
 |
GTEX-1LH75
|
51-60
|
Female
|
GTEX-1LH75-1926 |
Ileum
|
PAXgene |
3
|
6 pieces, advanced mucosal glandular autolysis; target lymphoid aggregates are ~10% of tissue, delineated
|
Acceptable
|
 |
GTEX-1LKK1
|
51-60
|
Female
|
GTEX-1LKK1-2526 |
Ileum
|
PAXgene |
3
|
6 pieces, all muscularis; no target mucosa /lymphoid aggregates present
|
Unacceptable
|
 |
GTEX-1LSNL
|
51-60
|
Male
|
GTEX-1LSNL-1526 |
Ileum
|
PAXgene |
3
|
6 pieces, trace autolyzed mucosa, mainly muscularis
|
Unacceptable
|
 |
GTEX-1LSVX
|
61-70
|
Male
|
GTEX-1LSVX-1826 |
Ileum
|
PAXgene |
3
|
6 pieces; autolyzed mucosa with minimal lymphoid tissue; specimens have full thickness of ileal wall
|
Unacceptable
|
 |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-1526 |
Ileum
|
PAXgene |
3
|
2 pieces; moderately to severely autolyzed, but with significant lymphoid component in 5 of 6 pieces, one piece is muscularis only
|
Unacceptable
|
 |
GTEX-1LVAM
|
41-50
|
Female
|
GTEX-1LVAM-1526 |
Ileum
|
PAXgene |
1
|
6 pieces, muscularis, no target mucosa or lymphoid aggregates
|
Unacceptable
|
 |
GTEX-1LVAN
|
51-60
|
Female
|
GTEX-1LVAN-2226 |
Ileum
|
PAXgene |
1
|
6 pieces; largest piece has a half dozen lymphoid nodules; 1 piece has a single nodule; others have only autolyzed mucosa and submucosa; LCM
|
Acceptable
|
 |
GTEX-1LVAO
|
61-70
|
Male
|
GTEX-1LVAO-2526 |
Ileum
|
PAXgene |
1
|
6 pieces; thin band [0.2mm] of lymphoid tissue along autolyzed mucosal edge of several samples; muscularis propria present; LCM
|
Unacceptable
|
 |
GTEX-1M4P7
|
61-70
|
Male
|
GTEX-1M4P7-2126 |
Ileum
|
PAXgene |
3
|
6 pieces, only trace lymphoid aggregates
|
Unacceptable
|
 |