GTEX-1K2DA
|
51-60
|
Male
|
GTEX-1K2DA-2026 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; full thickness sections
|
Acceptable
|
|
GTEX-1K2DU
|
21-40
|
Male
|
GTEX-1K2DU-1926 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mucosa up to 1mm but glandular elements completely sloughed
|
Acceptable
|
|
GTEX-1K9T9
|
51-60
|
Female
|
GTEX-1K9T9-2826 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, target mucosa up to ~0.3mm, advanced autolysis, partially sloughed
|
Acceptable
|
|
GTEX-1KAFJ
|
51-60
|
Male
|
GTEX-1KAFJ-1426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; mucosal autolysis varies from moderate to severe, muscularis from slight to moderate
|
Acceptable
|
|
GTEX-1KANA
|
21-40
|
Male
|
GTEX-1KANA-1926 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; full thickness sections, focal serositis
|
Acceptable
|
|
GTEX-1KANB
|
51-60
|
Male
|
GTEX-1KANB-1526 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, target muscosa up to ~0.6mm, ~5-10% of thickness, glandular elements totally autolyzed
|
Acceptable
|
|
GTEX-1KANC
|
51-60
|
Female
|
GTEX-1KANC-0926 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; full thickness with some pericolonic fat on 3 pieces
|
Acceptable
|
|
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-2426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; mucosa autolyzed or sloughed; muscle intact; LCM+
|
Acceptable
|
|
GTEX-1KD5A
|
51-60
|
Male
|
GTEX-1KD5A-2026 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; autolyzed small intestine, but no significant lymphoid tissue.
|
Unacceptable
|
|
GTEX-1KWVE
|
21-40
|
Male
|
GTEX-1KWVE-2526 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; glands autolyzed, muscle intact
|
Acceptable
|
|
GTEX-1KXAM
|
61-70
|
Male
|
GTEX-1KXAM-2126 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, target mucosa up to ~0.5mm, ~10-15% thickness
|
Acceptable
|
|
GTEX-1L5NE
|
51-60
|
Male
|
GTEX-1L5NE-2026 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, target mucosa well-preserved, ~10-20% of thickness
|
Acceptable
|
|
GTEX-1LB8K
|
51-60
|
Male
|
GTEX-1LB8K-2626 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; some mucosal areas are severely autolyzed
|
Acceptable
|
|
GTEX-1LBAC
|
21-40
|
Male
|
GTEX-1LBAC-1626 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; full thickness sections
|
Acceptable
|
|
GTEX-1LC46
|
21-40
|
Male
|
GTEX-1LC46-1726 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; full thickness sections of ileum, no lymphoid tissue
|
Unacceptable
|
|
GTEX-1LC47
|
61-70
|
Male
|
GTEX-1LC47-2226 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa up to ~0.3mm, largely sloughed
|
Acceptable
|
|
GTEX-1LG7Y
|
51-60
|
Male
|
GTEX-1LG7Y-2126 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, target mucosa up to 0.4mm, ~10% of thickness, moderately advanced autolysis
|
Acceptable
|
|
GTEX-1LG7Z
|
21-40
|
Male
|
GTEX-1LG7Z-1426 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; all contain mucosa and muscle
|
Acceptable
|
|
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-1426 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; 3 are full thickness, 3 are mucosa/submucosa
|
Acceptable
|
|
GTEX-1LH75
|
51-60
|
Female
|
GTEX-1LH75-2126 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, target mucosa up to ~0.4mm, complete glandular mucosal autolysis, remnant lamina propria intact
|
Acceptable
|
|
GTEX-1LKK1
|
51-60
|
Female
|
GTEX-1LKK1-2226 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa up to ~0.2mm, advanced autolysis
|
Acceptable
|
|
GTEX-1LSNL
|
51-60
|
Male
|
GTEX-1LSNL-1726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces target mucosa up to `~0.3mm, glandular component totally autolyzed
|
Acceptable
|
|
GTEX-1LSNM
|
51-60
|
Male
|
GTEX-1LSNM-1626 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; 4 are full thickness, 2 are mucosa/submucosa only
|
Acceptable
|
|
GTEX-1LSVX
|
61-70
|
Male
|
GTEX-1LSVX-1726 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; mucosa totally autolyzed, but muscularis intact and could be used to compare with sigmoid [LCM]
|
Acceptable
|
|
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-1626 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; full thickness sections, mucosa is severely autolyzed, but muscularis is better preserved
|
Acceptable
|
|