GTEX-1GMR2
|
51-60
|
Male
|
GTEX-1GMR2-1026 |
Ileum
|
PAXgene |
1
|
6 pieces; several lymphoid nodules in well preserved mucosa
|
Acceptable
|
 |
GTEX-1GMR2
|
51-60
|
Male
|
GTEX-1GMR2-2526 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; 20% internal fibrous content in 1 piece; 5% in other
|
Acceptable
|
 |
GTEX-1GMR8
|
51-60
|
Female
|
GTEX-1GMR8-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces; 10% internal fat; tendon in 1 piece, 10% area [labeled]
|
Acceptable
|
 |
GTEX-1GMR8
|
51-60
|
Female
|
GTEX-1GMR8-2226 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; 70% external fibrofatty content in 1, 40% in other (26 black may have been trimmed)
|
Acceptable
|
 |
GTEX-1GN1W
|
51-60
|
Female
|
GTEX-1GN1W-0726 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; 10% tendon in 1, 30% fibrofatty and tendon in other
|
Acceptable
|
 |
GTEX-1GN1W
|
51-60
|
Female
|
GTEX-1GN1W-0826 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; 25% external fat & carried-over skeletal muscle in 1
|
Acceptable
|
 |
GTEX-1GN1W
|
51-60
|
Female
|
GTEX-1GN1W-1026 |
Lung
|
PAXgene |
1
|
2 pieces; extensive alveolar hemorrhage in 1; atelectasis in other; foci of emphysema
|
Acceptable
|
 |
GTEX-1GN1W
|
51-60
|
Female
|
GTEX-1GN1W-1226 |
Omentum
|
PAXgene |
1
|
2 pieces; 2 mm lymph node in 1 piece (20%)
|
Acceptable
|
 |
GTEX-1GN1W
|
51-60
|
Female
|
GTEX-1GN1W-1826 |
Ileum
|
PAXgene |
3
|
5 pieces; excessive autolysis of lymphoid tissue; muscularis propria in 4 of 5 pieces
|
Unacceptable
|
 |
GTEX-1GN1W
|
51-60
|
Female
|
GTEX-1GN1W-2426 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; 5% dermal fat; prominent sebaceous glands and hair follicles in some areas
|
Acceptable
|
 |
GTEX-1GN73
|
61-70
|
Male
|
GTEX-1GN73-0626 |
Omentum
|
PAXgene |
1
|
2 pieces; 10% fibrous content in 1 piece
|
Acceptable
|
 |
GTEX-1GN73
|
61-70
|
Male
|
GTEX-1GN73-2426 |
Heart
|
PAXgene |
1
|
2 pieces; areas of hypereosinophilia suggest ischemia, but no clear-cut signs of infarction; 10% internal fat in 1 piece
|
Acceptable
|
 |
GTEX-1GN73
|
61-70
|
Male
|
GTEX-1GN73-2526 |
Ileum
|
PAXgene |
2
|
6 pieces; partly autolyzed, but plentiful lymphoid tissue; variable amounts of muscularis propria in 4 pieces
|
Acceptable
|
 |
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-2026 |
Ileum
|
PAXgene |
1
|
6 pieces; full thickness sections with residual attached fat, several good lymphoid follicles in 2 of 6 pieces
|
Unacceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-2426 |
Ileum
|
PAXgene |
3
|
6 pieces,; insufficient lymphoid aggregates for analysis in correct target
|
Unacceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-0326 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; mature adipose tissue with fibrovascular component and one piece with vessel wall (outlined) up to ~3mm in thickness
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-0826 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; small ~ 1mm in diameter well circumscribed likely adenomatous nodule (outlined), some interstitial fibrosis, variably sized follicles
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-2626 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; adipose tissue and ductal structures embedded in loose, cellular connective tissue, c/w gynecomastoid change
|
Acceptable
|
 |
GTEX-1GZ4I
|
51-60
|
Male
|
GTEX-1GZ4I-1726 |
Pancreas
|
PAXgene |
2
|
2 pieces; 1 mm calcium deposit in a vessel wall plus a smaller one
|
Acceptable
|
 |
GTEX-1GZ4I
|
51-60
|
Male
|
GTEX-1GZ4I-2526 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; abundant fatty submucosa in 3 of 6 pieces
|
Acceptable
|
 |
GTEX-1H11D
|
41-50
|
Male
|
GTEX-1H11D-0126 |
Adipose tissue
|
PAXgene |
0
|
2 pieces; large central defect in one (?poor fixation), <10% fibrous tissue
|
Acceptable
|
 |
GTEX-1H1CY
|
61-70
|
Female
|
GTEX-1H1CY-0526 |
Coronary artery
|
PAXgene |
1
|
2 pieces; extensive occlusive calcified atheromatous plaques narrowing lumen by 80% in 1 and possibly totally occluded in other; 1 piece with 50% external fat; sample is of limited value due to small amount of normal tissue remaining
|
Unacceptable
|
 |
GTEX-1H23P
|
61-70
|
Male
|
GTEX-1H23P-1726 |
Omentum
|
PAXgene |
1
|
2 pieces: 10% fibrovascular content in 1; <5% in other
|
Acceptable
|
 |
GTEX-1H23P
|
61-70
|
Male
|
GTEX-1H23P-1826 |
Liver
|
PAXgene |
1
|
2 pieces: 10% vascular content in 1; not congested
|
Acceptable
|
 |
GTEX-1H2FU
|
61-70
|
Female
|
GTEX-1H2FU-2226 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; glomeruli in all sections, few sclerotic
|
Acceptable
|
 |