GTEX-1OJC4
|
51-60
|
Female
|
GTEX-1OJC4-1626 |
Pancreas
|
PAXgene |
2
|
2 pieces; include 5-15% fat, mild fibrosis
|
Acceptable
|
|
GTEX-1OJC4
|
51-60
|
Female
|
GTEX-1OJC4-1726 |
Adipose tissue
|
PAXgene |
0
|
2 pieces; 20-40% fibrovascular component
|
Acceptable
|
|
GTEX-1OJC4
|
51-60
|
Female
|
GTEX-1OJC4-1826 |
Spleen
|
PAXgene |
2
|
2 pieces; congestion, one piece includes ~10% fat
|
Acceptable
|
|
GTEX-1OJC4
|
51-60
|
Female
|
GTEX-1OJC4-1926 |
Stomach
|
PAXgene |
3
|
6 pieces; full thickness sections, mucosa and muscularis are largely autolyzed
|
Acceptable
|
|
GTEX-1OJC4
|
51-60
|
Female
|
GTEX-1OJC4-2026 |
Ovary
|
PAXgene |
0
|
2 pieces; corpora albicantia
|
Acceptable
|
|
GTEX-1OJC4
|
51-60
|
Female
|
GTEX-1OJC4-2126 |
Uterus
|
PAXgene |
0
|
2 pieces
|
Acceptable
|
|
GTEX-1OJC4
|
51-60
|
Female
|
GTEX-1OJC4-2226 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; predominantly muscularis, 4 include strips of largely autolyzed mucosa
|
Acceptable
|
|
GTEX-1OJC4
|
51-60
|
Female
|
GTEX-1OJC4-2326 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; predominantly cortex, 2 are (largely) medulla, arteriosclerosis
|
Acceptable
|
|
GTEX-1OJC4
|
51-60
|
Female
|
GTEX-1OJC4-2426 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; cortex and medulla, one is ~40% fat
|
Acceptable
|
|
GTEX-1OJC4
|
51-60
|
Female
|
GTEX-1OJC4-2526 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; full thickness sections, mucosa largely autolyzed
|
Acceptable
|
|
GTEX-1OJC4
|
51-60
|
Female
|
GTEX-1OJC4-2626 |
Ileum
|
PAXgene |
2
|
6 pieces; full thickness sections (muscularis is not target), only scattered lymphoid follicles
|
Unacceptable
|
|
GTEX-1OJC4
|
51-60
|
Female
|
GTEX-1OJC4-2726 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; 3 are well trimmed, 3 include ~5-10 % attached fat
|
Acceptable
|
|
GTEX-1OJC4
|
51-60
|
Female
|
GTEX-1OJC4-2826 |
Brain - cortex
|
PAXgene |
1
|
4 pieces (fragmented); some meninges present, includes significant white matter
|
Acceptable
|
|
GTEX-1OJC4
|
51-60
|
Female
|
GTEX-1OJC4-2926 |
Brain - cerebellum
|
PAXgene |
1
|
5 pieces; mild to moderate autolysis
|
Acceptable
|
|
GTEX-1OJC4
|
51-60
|
Female
|
GTEX-1OJC4-3026 |
Pituitary gland
|
PAXgene |
1
|
1 piece; adenohypophysis
|
Acceptable
|
|
GTEX-1OJC4
|
51-60
|
Female
|
GTEX-1OJC4-3126 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; 20 and 60% salivary gland elements, rest is mostly fat/nerve
|
Acceptable
|
|
GTEX-1PBJI
|
21-40
|
Female
|
GTEX-1PBJI-0126 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, <5% interstitial fat
|
Acceptable
|
|
GTEX-1PBJI
|
21-40
|
Female
|
GTEX-1PBJI-0226 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, trace adherent fat, nubbins < 0.5mm
|
Acceptable
|
|
GTEX-1PBJI
|
21-40
|
Female
|
GTEX-1PBJI-0326 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, no atherosis, trace rim of fibrous tissue, <0.3mm
|
Acceptable
|
|
GTEX-1PBJI
|
21-40
|
Female
|
GTEX-1PBJI-0426 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~10% fascia/vascular elements, rep delineated
|
Acceptable
|
|
GTEX-1PBJI
|
21-40
|
Female
|
GTEX-1PBJI-0526 |
Skin, leg
|
PAXgene |
0
|
6 pieces, no significant dermal fat; squamous epithelium up to ~50 microns
|
Acceptable
|
|
GTEX-1PBJI
|
21-40
|
Female
|
GTEX-1PBJI-0626 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces, fibrous mastopathy, rare ductal elements only, rep delineated
|
Acceptable
|
|
GTEX-1PBJI
|
21-40
|
Female
|
GTEX-1PBJI-0726 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1PBJI
|
21-40
|
Female
|
GTEX-1PBJI-0826 |
Lung
|
PAXgene |
1
|
2 pieces, acute (minimal) and chronic pneumonitiis, mainly interstitial
|
Acceptable
|
|
GTEX-1PBJI
|
21-40
|
Female
|
GTEX-1PBJI-0926 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, glomeruli present, moderate tubular autolysis
|
Acceptable
|
|