GTEX-1LVAN
|
51-60
|
Female
|
GTEX-1LVAN-1626 |
Vagina
|
PAXgene |
0
|
6 pieces; focally sloughed surface
|
Acceptable
|
|
GTEX-1LVAN
|
51-60
|
Female
|
GTEX-1LVAN-1726 |
Heart
|
PAXgene |
1
|
2 pieces; scattered enlarged myofibers; slight increase of interstitial fibrous tissue
|
Acceptable
|
|
GTEX-1LVAN
|
51-60
|
Female
|
GTEX-1LVAN-1826 |
Coronary artery
|
PAXgene |
1
|
2 pieces; moderately occlusive fibroatheromatous plaque; 1 piece has 40% untrimmed external adipose content
|
Acceptable
|
|
GTEX-1LVAN
|
51-60
|
Female
|
GTEX-1LVAN-1926 |
Uterus
|
PAXgene |
0
|
2 pieces; atrophic endometrium in 1 piece with myometrial predominance; myometrium only in other piece (in this cut)
|
Acceptable
|
|
GTEX-1LVAN
|
51-60
|
Female
|
GTEX-1LVAN-2026 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well dissected muscularis propria
|
Acceptable
|
|
GTEX-1LVAN
|
51-60
|
Female
|
GTEX-1LVAN-2126 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; well dissected muscularis propria
|
Acceptable
|
|
GTEX-1LVAN
|
51-60
|
Female
|
GTEX-1LVAN-2226 |
Ileum
|
PAXgene |
1
|
6 pieces; largest piece has a half dozen lymphoid nodules; 1 piece has a single nodule; others have only autolyzed mucosa and submucosa; LCM
|
Acceptable
|
|
GTEX-1LVAN
|
51-60
|
Female
|
GTEX-1LVAN-2326 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; focal submucosal glands in 2 pieces
|
Acceptable
|
|
GTEX-1LVAN
|
51-60
|
Female
|
GTEX-1LVAN-2426 |
Stomach
|
PAXgene |
2
|
6 pieces; mucosal autolysis varies from slight to severe; muscularis missing on 1 piece
|
Acceptable
|
|
GTEX-1LVAN
|
51-60
|
Female
|
GTEX-1LVAN-2526 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; mucosal autolysis varies from slight to severe
|
Acceptable
|
|
GTEX-1LVAN
|
51-60
|
Female
|
GTEX-1LVAN-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; well dissected muscularis propria
|
Acceptable
|
|
GTEX-1LVAN
|
51-60
|
Female
|
GTEX-1LVAN-2726 |
Ovary
|
PAXgene |
0
|
2 pieces; 1 with numerous corpora albicantia
|
Acceptable
|
|
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-0126 |
Thyroid gland
|
PAXgene |
0
|
2 pieces, not thyroid; normal thymus
|
Unacceptable
|
|
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-0226 |
Aorta
|
PAXgene |
1
|
6 pieces, adherent serosa up to ~1.5mm, rep delineated
|
Acceptable
|
|
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-0326 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis; incidental mucus gland delineated
|
Acceptable
|
|
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-0426 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa up to ~0.4mm; ~15-20% thickness;incidental submucosal mucus glands delineated(rep)
|
Acceptable
|
|
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-0526 |
Omentum
|
PAXgene |
1
|
2 pieces; incidental ~2.5mm omental lymph node present, delineated; ~5-10% fascia, vascular elements
|
Acceptable
|
|
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-0626 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, mucosa well preserved, ~0.3mm, ~10-15% thickness
|
Acceptable
|
|
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-0726 |
Ileum
|
PAXgene |
1
|
6 pieces, well-defined lymphoid aggregates delineated, ~20% of tissue
|
Acceptable
|
|
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-0826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, ~target muscularis delineated, ~50% of tissue, rest is 'contaminant' serosa/mucosa
|
Acceptable
|
|
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-0926 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, target muscularis (delineated) is ~60% of tissue, rest is 'contaminant' mucosa/serosa
|
Acceptable
|
|
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-1026 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces, fibrous mastopathy. Rare atrophic duct/lobular units, rep delineated
|
Acceptable
|
|
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-1126 |
Stomach
|
PAXgene |
1
|
6 pieces, mucosa up to ~1mm, ~20% of thickness; microcystic gland dilation with actue inflammation/cell necrosis in microcysts (based on review of glass slide; concurrence within PRC)
|
Acceptable
|
|
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-1226 |
Vagina
|
PAXgene |
1
|
6 pieces, squamous mucosa up to ~0.4mm, submucosal Mullerian rests with squamous metaplasia present, rep delineated
|
Acceptable
|
|
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-1326 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces, squamous epithelium up to ~50 microns; adherent dermal fat nubbins up to ~1mm, rep delineated
|
Acceptable
|
|