GTEX-1J8EW
|
51-60
|
Female
|
GTEX-1J8EW-2126 |
Ileum
|
PAXgene |
2
|
5 pieces; muscularis sampled in 3 pieces; only small amount of lymphoid tissue present
|
Unacceptable
|
 |
GTEX-1J8JJ
|
61-70
|
Female
|
GTEX-1J8JJ-2226 |
Ileum
|
PAXgene |
3
|
6 pieces, only with trace residual lymphoid elements
|
Unacceptable
|
 |
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-2326 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa, good lymphoid component (but partially autolyzed), muscularis (not target)
|
Unacceptable
|
 |
GTEX-1J8Q3
|
61-70
|
Male
|
GTEX-1J8Q3-2526 |
Ileum
|
PAXgene |
0
|
6 pieces; well preserved mucosa and numerous lymphoid nodules
|
Acceptable
|
 |
GTEX-1J8QM
|
61-70
|
Female
|
GTEX-1J8QM-1026 |
Ileum
|
PAXgene |
1
|
6 pieces; mucosa and submucosa with abundance of target lymphoid aggregates
|
Acceptable
|
 |
GTEX-1JJ6O
|
61-70
|
Male
|
GTEX-1JJ6O-2326 |
Ileum
|
PAXgene |
2
|
6 pieces; largely autolyzed mucosa/submucosa with only scattered lymphoid component, too minimal to warrant analysis
|
Unacceptable
|
 |
GTEX-1JJE9
|
61-70
|
Male
|
GTEX-1JJE9-2226 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa with residual lymphoid tissue comprising 20-50%
|
Acceptable
|
 |
GTEX-1JJEA
|
61-70
|
Male
|
GTEX-1JJEA-2026 |
Ileum
|
PAXgene |
2
|
6 pieces, ~20-30% lymphoid aggregates, delineated
|
Acceptable
|
 |
GTEX-1JK1U
|
61-70
|
Male
|
GTEX-1JK1U-1226 |
Ileum
|
PAXgene |
1
|
6 pieces, ~20% target lymphoid aggregates, rep delineated
|
Acceptable
|
 |
GTEX-1JKYN
|
21-40
|
Male
|
GTEX-1JKYN-2426 |
Ileum
|
PAXgene |
1
|
6 pieces; mucosa/submucosa with scattered lymphoid aggregates
|
Unacceptable
|
 |
GTEX-1JKYR
|
21-40
|
Male
|
GTEX-1JKYR-1826 |
Ileum
|
PAXgene |
1
|
6 pieces; muscle only, no mucosa
|
Unacceptable
|
 |
GTEX-1JMLX
|
51-60
|
Male
|
GTEX-1JMLX-2626 |
Ileum
|
PAXgene |
1
|
6 pieces; well dissected with abundant lymphoid tissue
|
Acceptable
|
 |
GTEX-1JMOU
|
61-70
|
Female
|
GTEX-1JMOU-2126 |
Ileum
|
PAXgene |
2
|
6 pieces, muscularis, trace autolyzed mucosa. Target lymphoid aggregates less than 1% of tissue
|
Unacceptable
|
 |
GTEX-1JMPY
|
21-40
|
Male
|
GTEX-1JMPY-1126 |
Ileum
|
PAXgene |
1
|
6 pieces; predominantly mucosa with few strips of residual muscularis (not target) and only rare lymphoid aggregate
|
Unacceptable
|
 |
GTEX-1JMPZ
|
21-40
|
Male
|
GTEX-1JMPZ-2526 |
Ileum
|
PAXgene |
1
|
5 pieces; abundant lymphoid tissue in 3 pieces
|
Acceptable
|
 |
GTEX-1JMQI
|
51-60
|
Male
|
GTEX-1JMQI-1526 |
Ileum
|
PAXgene |
1
|
6 pieces; autolyzing mucosa and muscularis (not target) with minimal lymphoid tissue
|
Unacceptable
|
 |
GTEX-1JMQJ
|
51-60
|
Male
|
GTEX-1JMQJ-2726 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa with small portion of muscularis (not target), lymphoid tissue insufficient for analysis
|
Unacceptable
|
 |
GTEX-1JMQK
|
61-70
|
Male
|
GTEX-1JMQK-2426 |
Ileum
|
PAXgene |
1
|
6 pieces; 10 small lymphoid nodules in autolyzed mucosa (circled) LCM
|
Acceptable
|
 |
GTEX-1JMQL
|
51-60
|
Female
|
GTEX-1JMQL-2626 |
Ileum
|
PAXgene |
3
|
6 pieces autolyzed mucosal stroma, trace lymphoid aggregates
|
Unacceptable
|
 |
GTEX-1JN1M
|
61-70
|
Female
|
GTEX-1JN1M-2826 |
Ileum
|
PAXgene |
3
|
5 pieces, ~10-20 lymphoid aggregates, delineated
|
Acceptable
|
 |
GTEX-1JN6P
|
61-70
|
Male
|
GTEX-1JN6P-1826 |
Ileum
|
PAXgene |
1
|
6 pieces; lymphoid tissue in 4 pieces well preserved, occupies 10% to 70% area; mucosa autolyzed; LCM
|
Acceptable
|
 |
GTEX-1JN76
|
21-40
|
Female
|
GTEX-1JN76-1126 |
Ileum
|
PAXgene |
1
|
5 pieces; well preserved lymphoid nodules; abundant well preserved mucosa; LCM
|
Acceptable
|
 |
GTEX-1K2DA
|
51-60
|
Male
|
GTEX-1K2DA-1426 |
Ileum
|
PAXgene |
1
|
6 pieces; mucosa and submucosa with only focal lymphoid tissue (1 of 6 pieces)
|
Unacceptable
|
 |
GTEX-1K2DU
|
21-40
|
Male
|
GTEX-1K2DU-2126 |
Ileum
|
PAXgene |
3
|
6 pieces, advanced autolysis; insufficient target lymphoid aggregates present (<1%)
|
Unacceptable
|
 |
GTEX-1K9T9
|
51-60
|
Female
|
GTEX-1K9T9-2726 |
Ileum
|
PAXgene |
2
|
6 pieces, target lymphoid aggregates ~20% total tissue, rep delineated
|
Acceptable
|
 |