GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-0926 |
Ileum
|
PAXgene |
1
|
6 pieces, fibroadipose tissue, not GTEx target
|
Unacceptable
|
|
GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-1626 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, mainly fat/fibrous tissue, target artery is <20% specimen
|
Unacceptable
|
|
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-0826 |
Vagina
|
PAXgene |
1
|
6 pieces; variable fragments with minimal squamous epithelium in 3, associated chronic inflammation (outlined), muscle
|
Unacceptable
|
|
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-1626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; mildly autolyzed mucosa (not target) and well preserved muscularis (target)
|
Unacceptable
|
|
GTEX-16AAH
|
51-60
|
Male
|
GTEX-16AAH-1126 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, extensive mucosa/ connective tissue; muscularis is <50%
|
Unacceptable
|
|
GTEX-16BQI
|
21-40
|
Female
|
GTEX-16BQI-0426 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; abnormal vein, not artery; marked subintimal muscular thickening; up to 1.9 mm external fat; may be related to Buerger's disease
|
Unacceptable
|
|
GTEX-16BQI
|
21-40
|
Female
|
GTEX-16BQI-0826 |
Coronary artery
|
PAXgene |
1
|
2 pieces; excessive peripheral extraneous tissues, fat and myocardium, comprise >80% of sample; LCM
|
Unacceptable
|
|
GTEX-16BQI
|
21-40
|
Female
|
GTEX-16BQI-1226 |
Vagina
|
PAXgene |
3
|
6 pieces; urinary bladder sampled, not vagina
|
Unacceptable
|
|
GTEX-16BQI
|
21-40
|
Female
|
GTEX-16BQI-1426 |
Ileum
|
PAXgene |
3
|
6 pieces; all with muscularis and no lymphoid content in autolyzed mucosa
|
Unacceptable
|
|
GTEX-16BQI
|
21-40
|
Female
|
GTEX-16BQI-1826 |
Stomach
|
PAXgene |
2
|
6 pieces; all have mucosa only, no muscularis
|
Unacceptable
|
|
GTEX-16GPK
|
61-70
|
Male
|
GTEX-16GPK-2426 |
Ileum
|
PAXgene |
3
|
4 pieces; autolyzed mucosa and only focal lymphoid aggregate; small fragments of muscularis (not target)
|
Unacceptable
|
|
GTEX-16MT8
|
61-70
|
Female
|
GTEX-16MT8-0726 |
Coronary artery
|
PAXgene |
1
|
2 pieces fibroadipose/? sinus tissue, not coronary artery
|
Unacceptable
|
|
GTEX-16MT8
|
61-70
|
Female
|
GTEX-16MT8-2826 |
Ileum
|
PAXgene |
3
|
4 pieces, autolyzed mucosa, insufficient viable lymphoid aggregates to warrant analysis
|
Unacceptable
|
|
GTEX-16MT9
|
61-70
|
Female
|
GTEX-16MT9-0826 |
Coronary artery
|
PAXgene |
0
|
2 pieces; collapsed vein and fibroadipose tissue
|
Unacceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-0626 |
Coronary artery
|
PAXgene |
1
|
2 pieces; poorly trimmed: both pieces have at least 50% extraneous fat and myocardium
|
Unacceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-0926 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; all contain esophageal squamous mucosa, not muscularis propria [target]
|
Unacceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-1426 |
Ileum
|
PAXgene |
1
|
6 pieces; insufficient lymphoid tissue; all contain full thickness muscularis [not target]
|
Unacceptable
|
|
GTEX-16NFA
|
51-60
|
Male
|
GTEX-16NFA-1826 |
Stomach
|
PAXgene |
1
|
6 pieces; no mucosa, only muscularis propria and submucosa
|
Unacceptable
|
|
GTEX-16NPV
|
51-60
|
Female
|
GTEX-16NPV-1126 |
Coronary artery
|
PAXgene |
1
|
2 pieces; 50 & 80% external fat
|
Unacceptable
|
|
GTEX-16NPV
|
51-60
|
Female
|
GTEX-16NPV-2826 |
Ileum
|
PAXgene |
3
|
4 pieces; well dissected, but too autolyzed
|
Unacceptable
|
|
GTEX-16NPX
|
51-60
|
Male
|
GTEX-16NPX-2026 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces, mainly fat/vasuclar tissue, endstage nephritis/dystrophic appearing in trace residual kidney
|
Unacceptable
|
|
GTEX-16NPX
|
51-60
|
Male
|
GTEX-16NPX-2326 |
Ileum
|
PAXgene |
3
|
5 pieces, advanced autolysis, insufficient lymphoid aggregates to warrant analysis
|
Unacceptable
|
|
GTEX-16XZY
|
61-70
|
Male
|
GTEX-16XZY-0326 |
Coronary artery
|
PAXgene |
0
|
2 pieces; vein with adherent fat, connective tissue and myocardium
|
Unacceptable
|
|
GTEX-16XZY
|
61-70
|
Male
|
GTEX-16XZY-1226 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; stomach, not GE junction, predominantly mucosa with scant attached muscularis, chronic active gastritis
|
Unacceptable
|
|
GTEX-16XZY
|
61-70
|
Male
|
GTEX-16XZY-1326 |
Stomach
|
PAXgene |
1
|
6 pieces; MUSCULARIS, NOT STOMACH, up to ~1.3mm attached fibrofatty tissue
|
Unacceptable
|
|