GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-0626 |
Aorta
|
PAXgene |
1
|
6 pieces; moderate atheromatous plaque; focal calcification in 2 pieces
|
Acceptable
|
 |
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-1526 |
Esophagus - mucosa
|
PAXgene |
0
|
2 pieces; muscularis propria makes up 20 to 30% in 4 of 6 pieces [labeled]; large submucosal gland comprises 10% of 1 piece, 5% of another piece [labeled]
|
Acceptable
|
 |
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-1726 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; 3 pieces have mucosa as well as muscularis; foci of edematous, amyloid-like stroma or fibroelastosis in submucosa of 3 pieces [circled] (as in transverse colon)
|
Acceptable
|
 |
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-1926 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; foci of edematous, amyloid-like stroma or fibroelastosis in submucosa of 2 pieces, measuring up to 3x1mm, [labeled] like in sigmoid colon; no sign of amyloid in other tissues
|
Acceptable
|
 |
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-2126 |
Mammary tissue (breast)
|
PAXgene |
2
|
2 pieces; dense fibrous stroma and ductal proliferation consistent with gynecomastia, especially in 1 piece
|
Acceptable
|
 |
GTEX-1F6I4
|
51-60
|
Male
|
GTEX-1F6I4-1626 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; glomeruli in all sections, mild to moderate autolysis, includes portion of medulla
|
Acceptable
|
 |
GTEX-1F75B
|
51-60
|
Male
|
GTEX-1F75B-1926 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces; mucosa absent/autolyzed and moderately autolyzed submucosa, submucosal glands (outlined), minute fragments of residual squamous epithelium (arrows); scattered lymphoid aggregates in submucosa
|
Unacceptable
|
 |
GTEX-1F75W
|
61-70
|
Male
|
GTEX-1F75W-0726 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; 1.4 sq mm hemorrhage [circled]; several focal lymphocytic deposits in pericardium
|
Acceptable
|
 |
GTEX-1F75W
|
61-70
|
Male
|
GTEX-1F75W-1826 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces; 1.5 mm renal cell neoplasm in 1 piece; autolysis does not permit assessment of malignancy; by size (in this section) it is consistent with adenoma
|
Unacceptable
|
 |
GTEX-1F75W
|
61-70
|
Male
|
GTEX-1F75W-2026 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well dissected muscularis in general
|
Acceptable
|
 |
GTEX-1F75W
|
61-70
|
Male
|
GTEX-1F75W-2426 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; up to 50% fibrofatty submucosa in 3 of 6 pieces; 1 with prominent lymphoid component
|
Acceptable
|
 |
GTEX-1F75W
|
61-70
|
Male
|
GTEX-1F75W-2926 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; largely fibroadipose tissue with small foci of atrophic ducts in scar tissue and lymphoid cells consistent with glandular atrophy; no viable salivary glands
|
Unacceptable
|
 |
GTEX-1F7RK
|
21-40
|
Female
|
GTEX-1F7RK-1126 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces; glomeruli in all pieces
|
Acceptable
|
 |
GTEX-1F88F
|
61-70
|
Female
|
GTEX-1F88F-0726 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; 1 mm adenomatoid nodule in 1; 50% fat in other
|
Acceptable
|
 |
GTEX-1F88F
|
61-70
|
Female
|
GTEX-1F88F-0926 |
Lung
|
PAXgene |
1
|
2 pieces; extensive alveolar hemorrhage; areas of interstitial fibrosis; calcific focus in a bronchial wall; 0.1 mm bone marroe embolus [labeled]
|
Acceptable
|
 |
GTEX-1F88F
|
61-70
|
Female
|
GTEX-1F88F-1626 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; hemorrhagic foci in 2 pieces up to 1 mm [labeled]; extraneous bone fragments 0.2 mm [labeled]
|
Acceptable
|
 |
GTEX-1F88F
|
61-70
|
Female
|
GTEX-1F88F-2726 |
Skin, leg
|
PAXgene |
1
|
6 pieces; 10% dermal fat; prominent artery & hair follicle in 1 piece
|
Acceptable
|
 |
GTEX-1FIGZ
|
41-50
|
Male
|
GTEX-1FIGZ-1526 |
Skin, leg
|
PAXgene |
0
|
6 pieces; few contain significant attached adipose tissue (up to 50%), one lacks epidermis in this section, elsewhere epidermis measures about 29 microns
|
Acceptable
|
 |
GTEX-1GF9U
|
41-50
|
Female
|
GTEX-1GF9U-0826 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces (fragmented); focal inflammatory cells in epithelial layer
|
Acceptable
|
 |
GTEX-1GF9U
|
41-50
|
Female
|
GTEX-1GF9U-1026 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; target muscularis with residual attached mucosa in one piece, and attached fibrovascular and fatty tissue with suture material
|
Acceptable
|
 |
GTEX-1GF9U
|
41-50
|
Female
|
GTEX-1GF9U-1226 |
Omentum
|
PAXgene |
0
|
2 pieces; adipose tissue, central defect in 1 piece
|
Acceptable
|
 |
GTEX-1GF9U
|
41-50
|
Female
|
GTEX-1GF9U-1826 |
Uterus
|
PAXgene |
0
|
6 pieces; myometrium only in this section
|
Acceptable
|
 |
GTEX-1GF9W
|
61-70
|
Male
|
GTEX-1GF9W-1726 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces; autolyzed squamous epithelium and chronic inflammation in submucosa with scattered small aggregates of lymphocytes
|
Acceptable
|
 |
GTEX-1GMR2
|
51-60
|
Male
|
GTEX-1GMR2-0726 |
Testis
|
PAXgene |
1
|
2 pieces; moderate decrease in mature spermatogenesis
|
Acceptable
|
 |
GTEX-1GMR2
|
51-60
|
Male
|
GTEX-1GMR2-0826 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; well trimmed; minimal dermal fat; 2 mm deep apocrine gland in 1 piece [labeled]
|
Acceptable
|
 |