GTEX-11ZUS
|
21-40
|
Male
|
GTEX-11ZUS-1726 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, glomeruli in all sections
|
Acceptable
|
 |
GTEX-11ZVC
|
51-60
|
Female
|
GTEX-11ZVC-1926 |
Stomach
|
PAXgene |
3
|
6 pieces; mucosa too autolyzed for GTEx; muscularis variable in amount, might be useful for TMA or laser capture
|
Unacceptable
|
 |
GTEX-1212Z
|
61-70
|
Male
|
GTEX-1212Z-1626 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, glomeruli in all sections, few sclerotic, arteriosclerosis, some patchy chronic inflammation
|
Acceptable
|
 |
GTEX-1269C
|
61-70
|
Female
|
GTEX-1269C-1526 |
Pancreas
|
PAXgene |
3
|
2 pieces, ~10% fat, islets reduced in number and some with amyloid-like material
|
Acceptable
|
 |
GTEX-1269C
|
61-70
|
Female
|
GTEX-1269C-1726 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, glomeruli in all sections, some sclerotic, tubules very autolyzed
|
Acceptable
|
 |
GTEX-12BJ1
|
61-70
|
Male
|
GTEX-12BJ1-1726 |
Stomach
|
PAXgene |
1
|
6 pieces, well preserved mucoa; patchy acute/active gastritis with leukocytes in deep mucosa and submucosa, rep foci delineated. Mucosa up to ~0.5-0.7mm thick, ~20% total
|
Acceptable
|
 |
GTEX-12C56
|
21-40
|
Male
|
GTEX-12C56-0926 |
Ileum
|
PAXgene |
2
|
6 pieces, moderately autolyzed mucosa with abundant lymphoid tissue, muscularis (not target) also present in every piece
|
Unacceptable
|
 |
GTEX-12KS4
|
21-40
|
Male
|
GTEX-12KS4-1826 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces, moderate-severe autolysis; glomeruli seen in all sections
|
Acceptable
|
 |
GTEX-12WS9
|
51-60
|
Female
|
GTEX-12WS9-1426 |
Stomach
|
PAXgene |
2
|
6 pieces, mucosa up to 1mm thick;30-90 % of thickness but badly autolyzed, in some foci a "3"
|
Acceptable
|
 |
GTEX-12WS9
|
51-60
|
Female
|
GTEX-12WS9-1526 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa is 5% thickness, sloughed in some areas
|
Acceptable
|
 |
GTEX-12WSB
|
61-70
|
Female
|
GTEX-12WSB-0826 |
Lung
|
PAXgene |
2
|
2 pieces; extensive pneumonia in one piece; fibrosis and patchy pneumonia in other
|
Unacceptable
|
 |
GTEX-12WSB
|
61-70
|
Female
|
GTEX-12WSB-1526 |
Liver
|
PAXgene |
2
|
2 pieces; moderately congested; 30% fibrovascular focus in 1 piece; 1 mm von Meyenberg complex in 2nd piece
|
Acceptable
|
 |
GTEX-12WSD
|
61-70
|
Female
|
GTEX-12WSD-1626 |
Pancreas
|
PAXgene |
1
|
2 pieces, minimal fat. Islets stil visible; rep. delineated, but autolysis is approaching score '2' in some foci.
|
Acceptable
|
 |
GTEX-12WSD
|
61-70
|
Female
|
GTEX-12WSD-2126 |
Adrenal glands
|
PAXgene |
1
|
2 pieces, well preserved; abundant cortex and medulla visible in both sections (delineated)--valuable specimen
|
Acceptable
|
 |
GTEX-12WSE
|
21-40
|
Male
|
GTEX-12WSE-1426 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; submucosal gland in 3 pieces up to 1 mm
|
Acceptable
|
 |
GTEX-12WSE
|
21-40
|
Male
|
GTEX-12WSE-1626 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; adjacent fat in 4 pieces measures up to 2 mm thick
|
Acceptable
|
 |
GTEX-12WSG
|
51-60
|
Female
|
GTEX-12WSG-0826 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, glomeruli in all sections, rare sclerotic glomerulus, focal vascular hyalinization/thickening
|
Acceptable
|
 |
GTEX-12WSH
|
51-60
|
Male
|
GTEX-12WSH-0626 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; 10% internal fat in 1 piece
|
Acceptable
|
 |
GTEX-12WSH
|
51-60
|
Male
|
GTEX-12WSH-1926 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces; largely muscle with a focus of fibrous submucosa in 1 piece [annotated]
|
Acceptable
|
 |
GTEX-12WSI
|
51-60
|
Male
|
GTEX-12WSI-0526 |
Coronary artery
|
PAXgene |
1
|
2 pieces; adherent partial rim of fat, ~1mm, delineated; subtotally occlusive atherosis (~80%) in one section
|
Acceptable
|
 |
GTEX-12WSK
|
41-50
|
Female
|
GTEX-12WSK-2226 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces, well preserved but inactive appearing TDLUs in one section, rep delineated
|
Acceptable
|
 |
GTEX-12WSL
|
51-60
|
Male
|
GTEX-12WSL-0426 |
Pancreas
|
PAXgene |
1
|
2 pieces;[PREVIOUS REVIEW BEFORE RESOLUTION: Heart NOT Pancreas; 10% internal fat in 1 piece;] AFTER RESOLUTION: Pancreas with 60% external fat; foci of atrophy & fibrosis (annotated).
|
Acceptable
|
 |
GTEX-12WSL
|
51-60
|
Male
|
GTEX-12WSL-0626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; small focus [0.3 mm] parathyroid in 1 piece; 20% fat in 1 piece
|
Acceptable
|
 |
GTEX-12WSL
|
51-60
|
Male
|
GTEX-12WSL-0726 |
Atrial appendage
|
PAXgene |
0
|
2 pieces; 20% internal fat in 1 piece
|
Acceptable
|
 |
GTEX-12WSL
|
51-60
|
Male
|
GTEX-12WSL-0826 |
Heart
|
PAXgene |
1
|
2 pieces; 20% external and internal fat in 1 piece
|
Acceptable
|
 |