GTEX-15UKP
|
21-40
|
Male
|
GTEX-15UKP-0726 |
Testis
|
PAXgene |
1
|
2 pieces; active spermatogenesis
|
Acceptable
|
 |
GTEX-15UKP
|
21-40
|
Male
|
GTEX-15UKP-0826 |
Adrenal glands
|
PAXgene |
1
|
2 pieces; minimal attachment of fat, focal hemorrhage
|
Acceptable
|
 |
GTEX-15UKP
|
21-40
|
Male
|
GTEX-15UKP-0926 |
Spleen
|
PAXgene |
1
|
2 pieces; congestion/hemorrhage, includes capsule (target is 5mm below capsule)
|
Acceptable
|
 |
GTEX-15UKP
|
21-40
|
Male
|
GTEX-15UKP-1326 |
Pancreas
|
PAXgene |
1
|
2 pieces; minimal attached fat
|
Acceptable
|
 |
GTEX-15UKP
|
21-40
|
Male
|
GTEX-15UKP-1926 |
Lung
|
PAXgene |
1
|
2 pieces; includes pleura (target is 1cm below pleura), hemorrhage, edema
|
Acceptable
|
 |
GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-0126 |
Spleen
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-0226 |
Lung
|
PAXgene |
1
|
2 pieces patchy chronic, focally acute pneumonitis
|
Acceptable
|
 |
GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-0326 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, no abnormalities, trace adherent fat, delineated
|
Acceptable
|
 |
GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-0426 |
Omentum
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-0526 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa up to ~0.25mm, ~15% thickness
|
Acceptable
|
 |
GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-0626 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
 |
GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-0726 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, adherent gastric mucosa present, not GTEx target
|
Unacceptable
|
 |
GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-0826 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, sections of small intestine, unknown location, not GTEx target
|
Unacceptable
|
 |
GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-0926 |
Ileum
|
PAXgene |
1
|
6 pieces, fibroadipose tissue, not GTEx target
|
Unacceptable
|
 |
GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-1126 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, fibroadipose parenchymal elements, no ductal elements
|
Acceptable
|
 |
GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-1226 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces, 95% glandular/ductal elements, delineated
|
Acceptable
|
 |
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-0126 |
Spleen
|
PAXgene |
1
|
2 pieces; congestion, one piece contains capsule
|
Acceptable
|
 |
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-0226 |
Pancreas
|
PAXgene |
1
|
2 pieces; well preserved parenchyma and islets (rep outlined)
|
Acceptable
|
 |
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-0526 |
Lung
|
PAXgene |
1
|
2 pieces; congestion, includes pleura (target is 1 cm below pleura)
|
Acceptable
|
 |
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-0826 |
Vagina
|
PAXgene |
1
|
6 pieces; variable fragments with minimal squamous epithelium in 3, associated chronic inflammation (outlined), muscle
|
Unacceptable
|
 |
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-0926 |
Aorta
|
PAXgene |
1
|
6 pieces
|
Acceptable
|
 |
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-1026 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; surface epithelium desquamation and focal epithelial dissociation; squamous mucosa ~ 0.3mm thick; submucosal mucus glands and focal lymphocytic aggregates in submucosa; taken at GE junction (not target region 4 cm above), small leiomyoma
|
Acceptable
|
 |
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-1226 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; well trimmed target muscularis
|
Acceptable
|
 |
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-1326 |
Stomach
|
PAXgene |
1
|
6 pieces; well preserved gastric mucosa, lamina propria and muscularis (muscularis present in 2 of 6 pieces)
|
Acceptable
|
 |
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-1626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; mildly autolyzed mucosa (not target) and well preserved muscularis (target)
|
Unacceptable
|
 |