GTEX-1LSNM
|
51-60
|
Male
|
GTEX-1LSNM-1526 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; nerve/stroma/skeletal muscle, no salivary gland elements
|
Unacceptable
|
|
GTEX-1LSNM
|
51-60
|
Male
|
GTEX-1LSNM-1626 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; 4 are full thickness, 2 are mucosa/submucosa only
|
Acceptable
|
|
GTEX-1LSNM
|
51-60
|
Male
|
GTEX-1LSNM-1726 |
Testis
|
PAXgene |
1
|
2 pieces; atrophy with tubular hyalinization, increased Leydig cells
|
Acceptable
|
|
GTEX-1LSNM
|
51-60
|
Male
|
GTEX-1LSNM-1826 |
Prostate
|
PAXgene |
1
|
2 pieces; focal chronic inflammation and atrophy
|
Acceptable
|
|
GTEX-1LSNM
|
51-60
|
Male
|
GTEX-1LSNM-1926 |
Skin, leg
|
PAXgene |
1
|
6 pieces; includes from 5-15% fat; epidermis measures ~35-40 microns
|
Acceptable
|
|
GTEX-1LSNM
|
51-60
|
Male
|
GTEX-1LSNM-2026 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; mature fat
|
Acceptable
|
|
GTEX-1LSNM
|
51-60
|
Male
|
GTEX-1LSNM-2126 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; well trimmed, intimal thickening/mild plaque, focus of medial calcification
|
Acceptable
|
|
GTEX-1LSNM
|
51-60
|
Male
|
GTEX-1LSNM-2226 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; essentially well trimmed
|
Acceptable
|
|
GTEX-1LSNM
|
51-60
|
Male
|
GTEX-1LSNM-2326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces; skeletal muscle with from 5-15% fat/vessels/nerve
|
Acceptable
|
|
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-0126 |
Skin, leg
|
PAXgene |
1
|
6 pieces; well trimmed with minimal internal/periadnexal fat, epidermis measures about 34 microns, few collections of lymphocytes
|
Acceptable
|
|
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; mature fat, <10% fibrous tissue and nerve
|
Acceptable
|
|
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces; skeletal muscle with minimal internal fat
|
Acceptable
|
|
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-0426 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces; include 20 and 40% attached and internal fat
|
Acceptable
|
|
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-0526 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; mild atherosclerosis with focal calcification
|
Acceptable
|
|
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-0626 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; moderately to severely autolyzed, ~15% of 1 piece is fat/vessels
|
Acceptable
|
|
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-0726 |
Aorta
|
PAXgene |
1
|
6 pieces; mild plaque, some residual attached fat/adventitia
|
Acceptable
|
|
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-0826 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; up to 20% is fibrous, trivial internal fat
|
Acceptable
|
|
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-0926 |
Heart
|
PAXgene |
1
|
2 pieces; patchy areas of scar, some fragmentation of fibers, small component of perivascular fat
|
Acceptable
|
|
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-1026 |
Coronary artery
|
PAXgene |
1
|
2 pieces; calcific atherosclerosis with luminal narrowing of 50-75%, partial rim of attached fat up to 10-30%
|
Acceptable
|
|
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-1126 |
Lung
|
PAXgene |
2
|
2 pieces; marked congestion
|
Acceptable
|
|
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-1226 |
Omentum
|
PAXgene |
1
|
2 pieces; mature fat, few larger vessels
|
Acceptable
|
|
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-1326 |
Spleen
|
PAXgene |
2
|
2 pieces; congested
|
Acceptable
|
|
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-1426 |
Pancreas
|
PAXgene |
3
|
2 pieces; severely autolyzed pancreas
|
Unacceptable
|
|
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-1526 |
Ileum
|
PAXgene |
3
|
2 pieces; moderately to severely autolyzed, but with significant lymphoid component in 5 of 6 pieces, one piece is muscularis only
|
Unacceptable
|
|
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-1626 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; full thickness sections, mucosa is severely autolyzed, but muscularis is better preserved
|
Acceptable
|
|