GTEX-11NSD
|
21-40
|
Male
|
GTEX-11NSD-1126 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; squamous mucosa is ~10% thickness
|
Acceptable
|
|
GTEX-11NSD
|
21-40
|
Male
|
GTEX-11NSD-1226 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, all muscularis; focal stromal connective tissue
|
Acceptable
|
|
GTEX-11NSD
|
21-40
|
Male
|
GTEX-11NSD-1326 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, all muscularis, focal connective tissue
|
Acceptable
|
|
GTEX-11NSD
|
21-40
|
Male
|
GTEX-11NSD-1426 |
Stomach
|
PAXgene |
1
|
6 pieces, well- preserved mucosa is ~1mm, ~25% thickness
|
Acceptable
|
|
GTEX-11NSD
|
21-40
|
Male
|
GTEX-11NSD-1526 |
Colon, sigmoid
|
PAXgene |
1
|
4 pieces, mainly muscularis; trace 'contaminant' mucosa, delineated
|
Acceptable
|
|
GTEX-11NSD
|
21-40
|
Male
|
GTEX-11NSD-1626 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, well preserved mucosa is ~0.4mm thick, ~15% thickness
|
Acceptable
|
|
GTEX-11NSD
|
21-40
|
Male
|
GTEX-11NSD-1726 |
Ileum
|
PAXgene |
1
|
6 pieces, unusually abundant and well preserved lymphoid aggregates are ~50% total specimen.
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-0126 |
Skin, leg
|
PAXgene |
1
|
6 pieces, include internal and attached adipose tissue up to 40%, squamous epithelium measures ~40 microns
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-0226 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-0326 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, includes portion of nerve and small fragment of skeletal muscle
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-0426 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces, includes 10 and 30% attached fat
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-0526 |
Artery - tibial
|
PAXgene |
1
|
2 pieces, some intimal thickening, 1.1mm attachment of fat
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-0626 |
Heart
|
PAXgene |
1
|
2 pieces, some attached and internal fat (<10%) and interstitial and patchy fibrosis
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-0826 |
Lung
|
PAXgene |
1
|
2 pieces, includes pleura (target is 1 cm below pleura), numerous hemosiderin-laden macrophages, some congestion
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-1126 |
Coronary artery
|
PAXgene |
1
|
2 pieces, artery with atherosclerosis represents <10% of specimen which is predominantly fat with some cardiac muscle.
|
Unacceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-1226 |
Liver
|
PAXgene |
1
|
2 pieces, includes capsule (target is 1 cm below capsule), few collections of lymphocytes, often in portal tracts
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-1326 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, epithelium partially sloughing, some submucosal glands
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-1426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, 2 pieces include ~30% fat, vessels, and nerve
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-1726 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, small attachment of fat and nerve
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-2026 |
Omentum
|
PAXgene |
1
|
2 pieces, central defects in 1 piece (?poor fixation)
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-2526 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, large central defects (?poor fixation), small representation of fibrous tissue, no ductal elements
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-2726 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces, up to 40% attached subcutaneous fat
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-2826 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces, stroma, fat, skeletal muscle, and nerve
|
Unacceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-2926 |
Brain - cortex
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-3026 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces (fragmented)
|
Acceptable
|
|