GTEX-15RJE
|
41-50
|
Male
|
GTEX-15RJE-2526 |
Pancreas
|
PAXgene |
0
|
2 pieces; adipose tissue with 10% fibrous stroma and nerve; no pancreatic tissue
|
Unacceptable
|
 |
GTEX-15SB6
|
51-60
|
Female
|
GTEX-15SB6-1026 |
Stomach
|
PAXgene |
1
|
6 pieces; predominantly muscularis with few pieces including mucosa (not gastric body)
|
Unacceptable
|
 |
GTEX-15SB6
|
51-60
|
Female
|
GTEX-15SB6-1126 |
Ileum
|
PAXgene |
2
|
6 pieces; full thickness sections with largely autolyzed mucosa and only focal lymphoid tissue (target)
|
Unacceptable
|
 |
GTEX-15SB6
|
51-60
|
Female
|
GTEX-15SB6-1326 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; muscularis (target) and mucosa (not target)
|
Unacceptable
|
 |
GTEX-15SDE
|
51-60
|
Female
|
GTEX-15SDE-0426 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; all have mucosa, no muscularis propria
|
Unacceptable
|
 |
GTEX-15SDE
|
51-60
|
Female
|
GTEX-15SDE-1126 |
Ileum
|
PAXgene |
1
|
6 pieces; colonic mucosa not ileum
|
Unacceptable
|
 |
GTEX-15SHU
|
41-50
|
Female
|
GTEX-15SHU-2426 |
Ileum
|
PAXgene |
3
|
4 pieces; total autolysis
|
Unacceptable
|
 |
GTEX-15SHV
|
61-70
|
Male
|
GTEX-15SHV-0226 |
Adrenal glands
|
PAXgene |
0
|
2 pieces; no adrenal, all fat
|
Unacceptable
|
 |
GTEX-15SHW
|
61-70
|
Male
|
GTEX-15SHW-1526 |
Spleen
|
PAXgene |
1
|
2 pieces; blood clot
|
Unacceptable
|
 |
GTEX-15SHW
|
61-70
|
Male
|
GTEX-15SHW-2626 |
Ileum
|
PAXgene |
3
|
4 pieces; predominantly autolyzed mucosa with some muscularis, no significant/residual lymphoid tissue
|
Unacceptable
|
 |
GTEX-15SHW
|
61-70
|
Male
|
GTEX-15SHW-2726 |
Prostate
|
PAXgene |
2
|
2 pieces; fibromuscular stroma with some skeletal muscle fibers, small portion of periurethral transitional epithelium
|
Unacceptable
|
 |
GTEX-15SKB
|
61-70
|
Male
|
GTEX-15SKB-1426 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, only ~50% target muscularis, squamous mucosa present
|
Unacceptable
|
 |
GTEX-15TU5
|
51-60
|
Male
|
GTEX-15TU5-1526 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces; autolyzed gastric fundic mucosa with chronic gastritis; likely represents gastric mucosa in a hiatus hernia rather than glandular metaplasia or sampling error
|
Unacceptable
|
 |
GTEX-15TU5
|
51-60
|
Male
|
GTEX-15TU5-1626 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; owing to probability of gastric origin of 1525, 1625 should be regarded as gastric rather than esophageal; therefore not target tissue
|
Unacceptable
|
 |
GTEX-15TU5
|
51-60
|
Male
|
GTEX-15TU5-1726 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; 3 pieces have autolyzed gastric fundic mucosa with chronic gastritis; likely represents gastric mucosa in a hiatus hernia rather than glandular metaplasia or sampling error
|
Unacceptable
|
 |
GTEX-15UF6
|
61-70
|
Female
|
GTEX-15UF6-0526 |
Coronary artery
|
PAXgene |
1
|
2 pieces; extensive calcified atherosclerosis with little residual normal arterial content
|
Unacceptable
|
 |
GTEX-15UF6
|
61-70
|
Female
|
GTEX-15UF6-2826 |
Ileum
|
PAXgene |
3
|
4 pieces; lymphoid tissue autolyzed and dispersed; muscle content in 2 oieces
|
Unacceptable
|
 |
GTEX-15UF7
|
41-50
|
Male
|
GTEX-15UF7-1026 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces; major admixture of skeletal and smooth muscle indicating sampling of upper esophagus
|
Unacceptable
|
 |
GTEX-15UF7
|
41-50
|
Male
|
GTEX-15UF7-1126 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; full thickness sections, small intestine
|
Unacceptable
|
 |
GTEX-15UF7
|
41-50
|
Male
|
GTEX-15UF7-1426 |
Ileum
|
PAXgene |
2
|
6 pieces; mild to moderate autolysis, colon, not ileum
|
Unacceptable
|
 |
GTEX-15UKP
|
21-40
|
Male
|
GTEX-15UKP-1626 |
Ileum
|
PAXgene |
2
|
6 pieces; no significant lymphoid component
|
Unacceptable
|
 |
GTEX-15UKP
|
21-40
|
Male
|
GTEX-15UKP-1826 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; edema, mucosal autolysis
|
Unacceptable
|
 |
GTEX-15UKP
|
21-40
|
Male
|
GTEX-15UKP-2126 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces; minimal residual squamous epithelium
|
Unacceptable
|
 |
GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-0726 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, adherent gastric mucosa present, not GTEx target
|
Unacceptable
|
 |
GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-0826 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, sections of small intestine, unknown location, not GTEx target
|
Unacceptable
|
 |