GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-0326 |
Adrenal glands
|
PAXgene |
1
|
2 pieces; predominantly adrenal cortex with small portion of medulla
|
Acceptable
|
|
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-0426 |
Pancreas
|
PAXgene |
1
|
2 pieces; 20 and 80% is fat, mild fibrosis and chronic inflammation, foci of atrophy and PanIN-1B
|
Acceptable
|
|
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-0526 |
Omentum
|
PAXgene |
0
|
2 pieces; mature fat
|
Acceptable
|
|
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-0626 |
Liver
|
PAXgene |
1
|
2 pieces; severe steatosis with mild chronic inflammation, Mallory's hyaline, consistent with history of alcohol abuse
|
Acceptable
|
|
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-0726 |
Aorta
|
PAXgene |
1
|
6 pieces; mild plaque
|
Acceptable
|
|
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-0826 |
Coronary artery
|
PAXgene |
1
|
2 pieces; partial rim of adipose tissue (from 10-40%), intimal thickening
|
Acceptable
|
|
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-0926 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces; well trimmed with trivial internal fat
|
Acceptable
|
|
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-1026 |
Atrial appendage
|
PAXgene |
0
|
2 pieces; includes up to ~10% fat
|
Acceptable
|
|
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-1126 |
Heart
|
PAXgene |
1
|
2 pieces; focal, mild interstitial fibrosis
|
Acceptable
|
|
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-1226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; nodular goiter
|
Acceptable
|
|
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-1326 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; admixture of skeletal and smooth muscle suggesting sampling of upper esophagus, few clusters of submucosal glands
|
Unacceptable
|
|
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-1426 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; 3 are full thickness, 3 are mucosa/submucosa
|
Acceptable
|
|
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-1526 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; target muscularis, small leiomyoma (1.2mm)
|
Acceptable
|
|
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-1626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; includes several clusters of submucosal glands and few lymphoid aggregates, focal acute exudate with apparent fungal organisms, 1.9mm leiomyoma
|
Acceptable
|
|
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-1726 |
Stomach
|
PAXgene |
1
|
6 pieces; chronic active gastritis
|
Acceptable
|
|
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-1826 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; 50 and 70% fat, remainder is stroma with benign ducts and lobules
|
Acceptable
|
|
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-1926 |
Ileum
|
PAXgene |
1
|
6 pieces; only focal target lymphoid tissue, few sections include muscularis (not target)
|
Unacceptable
|
|
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-2026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis, some with residual attached submucosa and fat
|
Acceptable
|
|
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-2126 |
Vagina
|
PAXgene |
0
|
6 pieces; squamous mucosa is visible on 5 pieces, deep fat present on 3
|
Acceptable
|
|
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-2226 |
Uterus
|
PAXgene |
0
|
2 pieces; myometrium, prominent vessels, no endometrium in these sections
|
Acceptable
|
|
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-2326 |
Ovary
|
PAXgene |
1
|
2 pieces; several corpora albicantia
|
Acceptable
|
|
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-2426 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; mature fat, 1 piece has large central defect
|
Acceptable
|
|
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-2526 |
Skin, leg
|
PAXgene |
1
|
6 pieces; skin with up to ~10% internal fat, epidermis measures 25-35 microns
|
Acceptable
|
|
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-2626 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces; skeletal muscle with small portion of attached and internal fat, scattered fibers with degenerative change
|
Acceptable
|
|
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-2726 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; medial calcific sclerosis, intimal thickening
|
Acceptable
|
|