GTEX-1HFI7
|
51-60
|
Female
|
GTEX-1HFI7-1426 |
Ileum
|
PAXgene |
1
|
4 pieces; colon, not ileum
|
Unacceptable
|
|
GTEX-1HGF4
|
61-70
|
Male
|
GTEX-1HGF4-1826 |
Ileum
|
PAXgene |
2
|
6 pieces; abundant, moderately autolyzed lymphoid tissue with 75% muscularis propria;LCM
|
Unacceptable
|
|
GTEX-1HKZK
|
21-40
|
Male
|
GTEX-1HKZK-2226 |
Ileum
|
PAXgene |
2
|
6 pieces; moderately autolyzed mucosa, but with good lymphoid component
|
Acceptable
|
|
GTEX-1HR98
|
61-70
|
Male
|
GTEX-1HR98-2626 |
Ileum
|
PAXgene |
3
|
4 pieces; inadequate lymphoid tissue
|
Unacceptable
|
|
GTEX-1HR9M
|
61-70
|
Male
|
GTEX-1HR9M-1826 |
Ileum
|
PAXgene |
1
|
6 pieces; preserved lymphoid nodules in each piece, but comprise <50%
|
Acceptable
|
|
GTEX-1HSEH
|
61-70
|
Male
|
GTEX-1HSEH-1626 |
Ileum
|
PAXgene |
2
|
6 pieces, correct tissue but <5% target lymphoid aggregates
|
Unacceptable
|
|
GTEX-1HSGN
|
41-50
|
Female
|
GTEX-1HSGN-2126 |
Ileum
|
PAXgene |
1
|
6 pieces, abundant lymphoid aggregates,, 40-50% of tissue rep dlineated
|
Acceptable
|
|
GTEX-1HSKV
|
61-70
|
Male
|
GTEX-1HSKV-2126 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa with significant residual lymphoid component
|
Acceptable
|
|
GTEX-1HSMO
|
61-70
|
Male
|
GTEX-1HSMO-2626 |
Ileum
|
PAXgene |
1
|
4 pieces; lymphoid tissue intact, remaining tissue autolyzed; 1 piece has very little lymphoid component
|
Acceptable
|
|
GTEX-1HSMP
|
61-70
|
Male
|
GTEX-1HSMP-1026 |
Ileum
|
PAXgene |
1
|
6 pieces anatomic correct organ, only trace target lymphoid aggregates
|
Unacceptable
|
|
GTEX-1HSMQ
|
51-60
|
Male
|
GTEX-1HSMQ-2226 |
Ileum
|
PAXgene |
1
|
6 pieces; mucosa and submucosa with good lymphoid component
|
Acceptable
|
|
GTEX-1HT8W
|
21-40
|
Male
|
GTEX-1HT8W-2526 |
Ileum
|
PAXgene |
3
|
6 pieces, mucosa largely sloughed, trace lymphoid aggregates
|
Unacceptable
|
|
GTEX-1HUB1
|
61-70
|
Male
|
GTEX-1HUB1-2226 |
Ileum
|
PAXgene |
2
|
6 pieces; no lymphoid nodules present
|
Unacceptable
|
|
GTEX-1I19N
|
61-70
|
Male
|
GTEX-1I19N-2426 |
Ileum
|
PAXgene |
2
|
4 pieces; autolyzed with lack of target lymphoid aggregates
|
Unacceptable
|
|
GTEX-1I1CD
|
61-70
|
Female
|
GTEX-1I1CD-2726 |
Ileum
|
PAXgene |
3
|
4 pieces; autolyzed mucosa, no significant lymphoid tissue
|
Unacceptable
|
|
GTEX-1I1GP
|
51-60
|
Male
|
GTEX-1I1GP-2626 |
Ileum
|
PAXgene |
3
|
5 pieces, trace fragments, autolyzed mucosa, no target lymphoid aggregates
|
Unacceptable
|
|
GTEX-1I1GQ
|
51-60
|
Male
|
GTEX-1I1GQ-2626 |
Ileum
|
PAXgene |
3
|
5 pieces; totally autolyzed mucosa; too few lymphoid aggregates to warrant analysis (outlined)
|
Unacceptable
|
|
GTEX-1I1GR
|
51-60
|
Male
|
GTEX-1I1GR-2426 |
Ileum
|
PAXgene |
3
|
5 pieces, glandular elements with advanced autolysis; ~30% residual target lymphoid elements, rep delineated
|
Acceptable
|
|
GTEX-1I1GS
|
61-70
|
Male
|
GTEX-1I1GS-2826 |
Ileum
|
PAXgene |
3
|
6 pieces, 5-10% lymphoid aggregates, advanced autolysis
|
Unacceptable
|
|
GTEX-1I1GT
|
61-70
|
Female
|
GTEX-1I1GT-1826 |
Ileum
|
PAXgene |
1
|
6 pieces; predominantly partially autolyzed mucosa and submucosa with good (but variable) lymphoid component, small portion of muscularis in 1 piece
|
Acceptable
|
|
GTEX-1I1GU
|
41-50
|
Male
|
GTEX-1I1GU-1626 |
Ileum
|
PAXgene |
1
|
6 pieces; only 2 small [0.5mm] lymphoid nodules in otherwise well preserved ileal mucosa. LCM
|
Unacceptable
|
|
GTEX-1I1GV
|
61-70
|
Male
|
GTEX-1I1GV-2826 |
Ileum
|
PAXgene |
3
|
6 piece, glandular mucosa with advanced autolysis; residual target lymphoid aggregates are ~40% of tissue; rep delineated.s
|
Acceptable
|
|
GTEX-1I1HK
|
61-70
|
Male
|
GTEX-1I1HK-1826 |
Ileum
|
PAXgene |
2
|
6 pieces; full thickness sections (muscularis not target), lymphoid nodules are scattered and variably preserved
|
Unacceptable
|
|
GTEX-1I4MK
|
51-60
|
Female
|
GTEX-1I4MK-1826 |
Ileum
|
PAXgene |
1
|
6 pieces; abundant lymphoid tissue; muscularis propria present in all pieces; LCM
|
Unacceptable
|
|
GTEX-1I6K6
|
21-40
|
Male
|
GTEX-1I6K6-1626 |
Ileum
|
PAXgene |
2
|
6 pieces; muscularis (not target) and partially autolyzed mucosa, 3 pieces have good lymphoid component
|
Unacceptable
|
|