6 pieces; 4 are full thickness, 2 have no muscularis
Acceptable
GTEX-13CZU
21-40
Male
GTEX-13CZU-0826
Ileum
PAXgene
1
6 pieces; abundant lymphoid tissue [annotated]
Acceptable
GTEX-13CZU
21-40
Male
GTEX-13CZU-0926
Colon, transverse
PAXgene
1
6 pieces; 5 are full thickness, 1 is without muscularis
Acceptable
GTEX-13CZU
21-40
Male
GTEX-13CZU-1026
Colon, sigmoid
PAXgene
1
5 pieces; up to 0.8mm submucosa on each
Acceptable
GTEX-13CZU
21-40
Male
GTEX-13CZU-1126
Omentum
PAXgene
0
2 pieces
Acceptable
GTEX-13CZU
21-40
Male
GTEX-13CZU-1226
Skin, suprapubic
PAXgene
0
6 pieces; up to 3 hair follicles in each piece; well trimmed; <1% intradermal fat
Acceptable
GTEX-13CZU
21-40
Male
GTEX-13CZU-1326
Prostate
PAXgene
1
2 pieces; well preserved glands without hypertrophy
Acceptable
GTEX-13CZU
21-40
Male
GTEX-13CZU-1426
Mammary tissue (breast)
PAXgene
0
2 pieces; fibrofatty tissue without ducts
Acceptable
GTEX-13CZU
21-40
Male
GTEX-13CZU-1526
Testis
PAXgene
0
2 pieces; active spermatogenesis
Acceptable
GTEX-13CZU
21-40
Male
GTEX-13CZU-1626
Artery - tibial
PAXgene
0
2 pieces; several minute (56um) subintimal calcific deposits; otherwise no plaques; well dissected
Acceptable
GTEX-13CZU
21-40
Male
GTEX-13CZU-1726
Nerve - tibial
PAXgene
0
2 pieces; well trimmed; 20% internal fat in one
Acceptable
GTEX-13CZU
21-40
Male
GTEX-13CZU-1826
Adipose tissue
PAXgene
0
several fragmented pieces
Acceptable
GTEX-13CZU
21-40
Male
GTEX-13CZU-1926
Muscle, skeletal
PAXgene
1
2 pieces
Acceptable
GTEX-13CZU
21-40
Male
GTEX-13CZU-2026
Skin, leg
PAXgene
0
6 pieces; well trimmed; <5% intradermal fat
Acceptable
GTEX-13FTX
21-40
Female
GTEX-13FTX-0126
Spleen
PAXgene
0
2 pieces; capsule is present (target is 5mm below capsule), congestion, diminished white pulp
Acceptable
GTEX-13FTX
21-40
Female
GTEX-13FTX-0226
Aorta
PAXgene
0
6 pieces; includes small detached contaminating fragments of spleen
Acceptable
GTEX-13FTX
21-40
Female
GTEX-13FTX-0326
Lung
PAXgene
0
2 pieces; pleura is present (target is 1cm below pleura), some atelectasis
Acceptable
GTEX-13FTX
21-40
Female
GTEX-13FTX-0426
Esophagus - muscularis
PAXgene
0
6 pieces; 5 of 6 include muscularis, but ~50% of each is residual fat, vessels and significant component of nerve, one piece is entirely fat/incidental lymph node/vessels
Unacceptable
GTEX-13FTX
21-40
Female
GTEX-13FTX-0526
Esophagus - mucosa
PAXgene
0
4 pieces
Acceptable
GTEX-13FTX
21-40
Female
GTEX-13FTX-0626
Omentum
PAXgene
0
2 pieces
Acceptable
GTEX-13FTX
21-40
Female
GTEX-13FTX-0726
Stomach
PAXgene
1
6 pieces; all pieces include mucosa and muscularis, generally well preserved mucosa except for superficial glands