GTEX-1C6VS
|
61-70
|
Male
|
GTEX-1C6VS-1626 |
Heart
|
PAXgene |
1
|
2 pieces; mild interstitial fibrosis and internal fat; 1.6mm artery in 1 piece
|
Acceptable
|
 |
GTEX-1C6WA
|
61-70
|
Male
|
GTEX-1C6WA-1126 |
Coronary artery
|
PAXgene |
1
|
2 pieces; large calcific deposit in 1 piece; excessive perivascular extraneous fat over 60%
|
Acceptable
|
 |
GTEX-1C6WA
|
61-70
|
Male
|
GTEX-1C6WA-2426 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; largely fat with 20% fibrous content in 1 piece with a few ducts
|
Acceptable
|
 |
GTEX-1C6WA
|
61-70
|
Male
|
GTEX-1C6WA-2826 |
Ileum
|
PAXgene |
2
|
4 pieces; abundant but moderately autolyzed lymphoid tissue; muscle in 2 of 4
|
Acceptable
|
 |
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-1626 |
Pancreas
|
PAXgene |
2
|
2 pieces; mildly periductal fibrosis (arrows); PanIN 1A changes in ducts
|
Acceptable
|
 |
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-2226 |
Prostate
|
PAXgene |
1
|
2 pieces; fairly well preserved fibromuscular stroma and prostatic glandular component in 1 piece; not well preserved glands in the other
|
Acceptable
|
 |
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-2726 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces;~0.2mm thick squamous epithelium ; submucosal glands in 3 of 6 samples (outlined); well dissected
|
Acceptable
|
 |
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-2926 |
Pituitary gland
|
PAXgene |
1
|
1 piece; grade 1 and focally grade 2 autolyzed adenohypophysis and neurohypophysis; small 1.8mm in diameter cyst surrounded by fibrous tissue (outlined)
|
Acceptable
|
 |
GTEX-1CAMR
|
21-40
|
Male
|
GTEX-1CAMR-1126 |
Pancreas
|
PAXgene |
1
|
2 pieces, well -preserved Islets present in rare numbers, rep. delineated
|
Acceptable
|
 |
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-1226 |
Coronary artery
|
PAXgene |
1
|
2 pieces; ~0.6mm of attached adventitia; partial mild plaque in 1
|
Acceptable
|
 |
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-1426 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; atrophic ducts & lobules in mainly fibrous stroma
|
Acceptable
|
 |
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-1526 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; rare crystalline structures in small amount of submucosa, as described in the stomach
|
Unacceptable
|
 |
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-1726 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; ~0.25mm squamous epithelium; 2 pieces have some muscularis propria; crystals like those in stomach also in submucosa of esophagus
|
Unacceptable
|
 |
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-1826 |
Stomach
|
PAXgene |
1
|
6 pieces; autolyzed mucosa grade 1 focally approaching grade 2; in submucosa scattered crystalline deposits without a reaction, resemble resins; little or no muscularis present
|
Unacceptable
|
 |
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-2426 |
Ileum
|
PAXgene |
1
|
6 pieces; irregularly distributed target lymphoid aggregates (outlined) in half of the pieces; well dissectedmucosa & sumucosa
|
Acceptable
|
 |
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-5001 |
Muscle, skeletal
|
Dry Ice |
|
1 piece; comparable to content in PAXgene sample
|
Acceptable
|
 |
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-5004 |
Skin, leg
|
Dry Ice |
|
1 piece; comparable to content in PAXgene sample
|
Acceptable
|
 |
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-5007 |
Lung
|
Dry Ice |
|
2 pieces; lung parenchyma without the fibrosis and other changes seen in the PAXgene samples
|
Acceptable
|
 |
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-5013 |
Mammary tissue (breast)
|
Dry Ice |
|
1 piece; comparable to content in PAXgene sample
|
Acceptable
|
 |
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-0826 |
Pancreas
|
PAXgene |
2
|
2 pieces: large vessels in one, 10% internall fat in the other
|
Acceptable
|
 |
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-1026 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; prominent submucosal mucous glands in 5 pieces occupying up to 25%
|
Acceptable
|
 |
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-1126 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; submucosal fibrovascular tissue in all, up to 3.5 mm across, 1 with submucosal glands [labeled]
|
Acceptable
|
 |
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-1926 |
Ileum
|
PAXgene |
2
|
6 pieces; limited lymphoid tissue in 2 pieces [labeled]; mostly muscularis (non-target); LCM
|
Unacceptable
|
 |
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-2626 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; large fibrocalcific plaques; abundant external fibrofatty tissue in one
|
Acceptable
|
 |
GTEX-1CB4E
|
61-70
|
Male
|
GTEX-1CB4E-0626 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; 20% internal fat content in 1, 10% fibrous content in other
|
Acceptable
|
 |