GTEX-1B8SF
|
61-70
|
Male
|
GTEX-1B8SF-1426 |
Skin, leg
|
PAXgene |
1
|
6 pieces; well trimmed, epidermis measures 35 to 48 um thick
|
Acceptable
|
|
GTEX-1B8SF
|
61-70
|
Male
|
GTEX-1B8SF-1526 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; 3 of 6 represent well trimmed muscularis; remaining three pieces are mostly fibrovascular/fat/and nerves with focal residual muscularis on one (arrow)
|
Acceptable
|
|
GTEX-1B8SF
|
61-70
|
Male
|
GTEX-1B8SF-1626 |
Liver
|
PAXgene |
1
|
2 pieces; congestion, moderate steatosis
|
Acceptable
|
|
GTEX-1B8SF
|
61-70
|
Male
|
GTEX-1B8SF-1726 |
Omentum
|
PAXgene |
1
|
2 pieces; lobulated mature adipose tissue with septal vessels
|
Acceptable
|
|
GTEX-1B8SF
|
61-70
|
Male
|
GTEX-1B8SF-1826 |
Minor salivary glands
|
PAXgene |
1
|
3 pieces; predominantly salivary gland elements, 1 piece includes ~25% fibrous stroma/skeletal muscle (outlined)
|
Acceptable
|
|
GTEX-1B8SF
|
61-70
|
Male
|
GTEX-1B8SF-1926 |
Stomach
|
PAXgene |
3
|
6 pieces; severely autolyzed full thickness sections
|
Unacceptable
|
|
GTEX-1B8SF
|
61-70
|
Male
|
GTEX-1B8SF-2026 |
Ileum
|
PAXgene |
2
|
6 pieces; muscularis and autolyzed mucosa with some residual target lymphoid aggregates
|
Unacceptable
|
|
GTEX-1B8SF
|
61-70
|
Male
|
GTEX-1B8SF-2126 |
Colon, sigmoid
|
PAXgene |
2
|
5 pieces; predominantly muscularis with several strips of residual autolyzed mucosa
|
Unacceptable
|
|
GTEX-1B8SF
|
61-70
|
Male
|
GTEX-1B8SF-2226 |
Pancreas
|
PAXgene |
3
|
2 pieces; marked autolysis of parenchyma and fat; periductal and interstitial fibrosis with focal accumulation of laminated, psammoma body-like material (outlined)
|
Acceptable
|
|
GTEX-1B8SF
|
61-70
|
Male
|
GTEX-1B8SF-2326 |
Gastroesophageal junction
|
PAXgene |
3
|
6 pieces; autolyzed muscularis and significant residual autolyzed gastric mucosa on several pieces)
|
Unacceptable
|
|
GTEX-1B8SF
|
61-70
|
Male
|
GTEX-1B8SF-2426 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; glomeruli in all sections
|
Acceptable
|
|
GTEX-1B8SF
|
61-70
|
Male
|
GTEX-1B8SF-2526 |
Spleen
|
PAXgene |
1
|
2 pieces; marked congestion
|
Acceptable
|
|
GTEX-1B8SF
|
61-70
|
Male
|
GTEX-1B8SF-2626 |
Prostate
|
PAXgene |
2
|
3 pieces; two pieces of markedly autolyzed proliferating glandular component and one piece of fibromuscular stroma
|
Acceptable
|
|
GTEX-1B8SF
|
61-70
|
Male
|
GTEX-1B8SF-2726 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; adrenal cortex and medulla, one piece with ~20% external fat
|
Acceptable
|
|
GTEX-1B8SF
|
61-70
|
Male
|
GTEX-1B8SF-2826 |
Colon, transverse
|
PAXgene |
2
|
7 pieces; most include both moderately to severely autolyzed mucosa and muscularis
|
Unacceptable
|
|
GTEX-1B8SF
|
61-70
|
Male
|
GTEX-1B8SF-2926 |
Testis
|
PAXgene |
1
|
2 pieces; spermatogenesis present, some hyalinized tubules
|
Acceptable
|
|
GTEX-1B8SF
|
61-70
|
Male
|
GTEX-1B8SF-3026 |
Brain - cerebellum
|
PAXgene |
2
|
3 pieces with fragmentation; cerebellum, not cortex, portion of attached meninges
|
Acceptable
|
|
GTEX-1B8SF
|
61-70
|
Male
|
GTEX-1B8SF-3126 |
Brain - cortex
|
PAXgene |
1
|
2 pieces and few fragments; cerebral cortex, not cerebellum
|
Acceptable
|
|
GTEX-1B8SF
|
61-70
|
Male
|
GTEX-1B8SF-3226 |
Pituitary gland
|
PAXgene |
1
|
1 pieces; adenohypophysis and neurohypophysis
|
Acceptable
|
|
GTEX-1B98T
|
61-70
|
Male
|
GTEX-1B98T-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces, no dermal fat; squamous epithelium is ~30 microns
|
Acceptable
|
|
GTEX-1B98T
|
61-70
|
Male
|
GTEX-1B98T-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces. Fascia/vasuclar elements are <10% of tissue, rep delineated
|
Acceptable
|
|
GTEX-1B98T
|
61-70
|
Male
|
GTEX-1B98T-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces. Muscle fibers mildly atrophic; interstitial fat is ~25-30% total tissue, rep delineated
|
Acceptable
|
|
GTEX-1B98T
|
61-70
|
Male
|
GTEX-1B98T-0426 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, trace nubbin of adherent fat, <0.5mm, delineated
|
Acceptable
|
|
GTEX-1B98T
|
61-70
|
Male
|
GTEX-1B98T-0526 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, adherent fat (rep delineated/pascinian corpuscle (ensquared) are ~40% of tissue
|
Acceptable
|
|
GTEX-1B98T
|
61-70
|
Male
|
GTEX-1B98T-0626 |
Testis
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
|