GTEX-14XAO
|
61-70
|
Female
|
GTEX-14XAO-1926 |
Ileum
|
PAXgene |
1
|
6 pieces, well-preserved, ~40% target lymphoid aggregates
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-14XAO
|
61-70
|
Female
|
GTEX-14XAO-2026 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, up to ~0.5mm, ~30% thickness
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-15CHC
|
61-70
|
Female
|
GTEX-15CHC-0126 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; 10% external fibrofatty tissue
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-15CHC
|
61-70
|
Female
|
GTEX-15CHC-0226 |
Lung
|
PAXgene |
1
|
2 pieces; bronchiectasis, emphysema, fibrosis, bronchitis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-15CHC
|
61-70
|
Female
|
GTEX-15CHC-0326 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; 5 & 10% internal fat content
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-15CHC
|
61-70
|
Female
|
GTEX-15CHC-0426 |
Heart
|
PAXgene |
1
|
2 pieces; no infarct
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-15CHC
|
61-70
|
Female
|
GTEX-15CHC-0526 |
Coronary artery
|
PAXgene |
1
|
2 pieces; prominent sclerotic, partly calcified plaque; 1 piece has 50% adjacent myocardium and fibrofatty tissue [labeled]
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-15CHC
|
61-70
|
Female
|
GTEX-15CHC-0626 |
Aorta
|
PAXgene |
1
|
6 pieces; up to 1 mm adventitial fat
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-15CHC
|
61-70
|
Female
|
GTEX-15CHC-0726 |
Spleen
|
PAXgene |
1
|
2 pieces; contains 0.2 mm capsule on both pieces
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-15CHC
|
61-70
|
Female
|
GTEX-15CHC-0826 |
Omentum
|
PAXgene |
1
|
2 pieces; minimal fibrovascular stroma
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-15CHC
|
61-70
|
Female
|
GTEX-15CHC-0926 |
Pancreas
|
PAXgene |
1
|
2 pieces: 50% fat in 1 piece; other piece has large internal nerve (10%) [circled]; focus of pigmented macrophages 1x1.5 mm [marked]
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-15CHC
|
61-70
|
Female
|
GTEX-15CHC-1026 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; only one duct seen [marked]
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-15CHC
|
61-70
|
Female
|
GTEX-15CHC-1126 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; well trimmed; 5-20% dermal fat
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-15CHC
|
61-70
|
Female
|
GTEX-15CHC-1226 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; well dissected glands; moderate ductal dilatation, atrophy and fibrosis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-15CHC
|
61-70
|
Female
|
GTEX-15CHC-1326 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces with up to 30% submucosal fibrovascular stroma
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-15CHC
|
61-70
|
Female
|
GTEX-15CHC-1426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces with up to 40% submucosal fibrovascular stroma
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-15CHC
|
61-70
|
Female
|
GTEX-15CHC-1526 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; only muscularis propria, no mucosa (target)
|
Unacceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-15CHC
|
61-70
|
Female
|
GTEX-15CHC-1626 |
Colon, transverse
|
PAXgene |
1
|
6 pieces: 2 without mucosa
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-15CHC
|
61-70
|
Female
|
GTEX-15CHC-1726 |
Ileum
|
PAXgene |
1
|
6 pieces; only 1 has lymphoid tissue and it is a tiny, 1mm, focus; also is full thickness bowel wall (not target)
|
Unacceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-15CHC
|
61-70
|
Female
|
GTEX-15CHC-1826 |
Stomach
|
PAXgene |
1
|
6 pieces; superficial foveolar cells sloughed
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-15CHC
|
61-70
|
Female
|
GTEX-15CHC-1926 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; 3 are muscularis propria [target]; 3 are mucosa [not target]
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-15CHC
|
61-70
|
Female
|
GTEX-15CHC-2026 |
Uterus
|
PAXgene |
1
|
2 pieces; all myometrium, no endometrium in this cut
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-15CHC
|
61-70
|
Female
|
GTEX-15CHC-2126 |
Skin, leg
|
PAXgene |
1
|
6 pieces; dermal elastosis; 50% dermal fat
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-15CHC
|
61-70
|
Female
|
GTEX-15CHC-2226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces;
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-15CHC
|
61-70
|
Female
|
GTEX-15CHC-2326 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; no plaques; well trimmed
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |