GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-0726 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; medial calcific sclerosis, both include significant extraneous tissue (fat, vein)
|
Acceptable
|
|
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-0826 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces; all include significant component of muscularis (not target)
|
Unacceptable
|
|
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-0926 |
Omentum
|
PAXgene |
1
|
2 pieces; lobulated mature fat, central defects (?poor fixation)
|
Acceptable
|
|
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-1026 |
Heart
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
|
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-1126 |
Coronary artery
|
PAXgene |
1
|
2 pieces; artery represents ~10-15% of 1 piece, rest is extraneous tissues (fibrous/fat/vein/nerve)
|
Unacceptable
|
|
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-1226 |
Pancreas
|
PAXgene |
1
|
2 pieces; islets are well visualized
|
Acceptable
|
|
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-1326 |
Thyroid gland
|
PAXgene |
1
|
2 pieces: focus of lymphocytes, detached fragments of myocardium
|
Acceptable
|
|
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-1426 |
Spleen
|
PAXgene |
0
|
2 pieces; includes capsule (target is 5mm below capsule)
|
Acceptable
|
|
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-1526 |
Ovary
|
PAXgene |
0
|
2 pieces; 1 piece is 70% vessels and fibrocollagenous stroma
|
Acceptable
|
|
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-1626 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces; target muscularis, two small fragments of residual mucosa
|
Acceptable
|
|
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-1726 |
Uterus
|
PAXgene |
1
|
2 pieces; myometrium
|
Acceptable
|
|
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-1826 |
Vagina
|
PAXgene |
1
|
6 pieces (fragmented); mostly stroma with skeletal muscle, only 2 pieces include partially denuded epithelium
|
Unacceptable
|
|
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-1926 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; minor representation of muscularis, predominantly submucosa
|
Unacceptable
|
|
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-2026 |
Stomach
|
PAXgene |
1
|
6 pieces; variable representation of mucosa, submucosa, and muscularis
|
Acceptable
|
|
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-2126 |
Ileum
|
PAXgene |
2
|
6 pieces; partially autolyzed mucosa, only scattered lymphoid aggregates, and muscularis (not target)
|
Unacceptable
|
|
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-2226 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis, small strip of residual mucosa
|
Acceptable
|
|
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-2326 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; full thickness sections
|
Acceptable
|
|
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-2426 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; 20-30% fat, remainder is fibrocollagenous tissue with rare ducts, focus of microcalcification
|
Acceptable
|
|
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-2526 |
Minor salivary glands
|
PAXgene |
0
|
3 pieces; 0, 20, and 40% salivary gland elements, remainder is fat, nerve, skeletal muscle, and vessels
|
Acceptable
|
|
GTEX-1IDJV
|
51-60
|
Male
|
GTEX-1IDJV-0126 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, trace dermal fat; squamous epithelium is ~40 microns
|
Acceptable
|
|
GTEX-1IDJV
|
51-60
|
Male
|
GTEX-1IDJV-0226 |
Skin, leg
|
PAXgene |
0
|
6 pieces, moderate interstitial dermal fat, rep. delineated; squamous epithelium is ~30-40 microns
|
Acceptable
|
|
GTEX-1IDJV
|
51-60
|
Male
|
GTEX-1IDJV-0326 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~10% fascia/vascular elments
|
Acceptable
|
|
GTEX-1IDJV
|
51-60
|
Male
|
GTEX-1IDJV-0426 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~30% interstitial fat, rep. delineated
|
Acceptable
|
|
GTEX-1IDJV
|
51-60
|
Male
|
GTEX-1IDJV-0526 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, no significant adherent fat
|
Acceptable
|
|
GTEX-1IDJV
|
51-60
|
Male
|
GTEX-1IDJV-0626 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, trace nubbins of adherent fat up to ~0.5mm, delineated
|
Acceptable
|
|