GTEX-1399T
|
61-70
|
Male
|
GTEX-1399T-1626 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces
|
Acceptable
|
|
GTEX-1399T
|
61-70
|
Male
|
GTEX-1399T-2026 |
Stomach
|
PAXgene |
2
|
6 pieces; well trimmed; mild to moderate mucosal autolysis
|
Acceptable
|
|
GTEX-1399U
|
41-50
|
Female
|
GTEX-1399U-2126 |
Ileum
|
PAXgene |
2
|
4 pieces, lymphoid aggregates ~10-15% total
|
Acceptable
|
|
GTEX-139D8
|
21-40
|
Female
|
GTEX-139D8-1326 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces; squamous epithelium partly fragmented; well trimmed
|
Acceptable
|
|
GTEX-139D8
|
21-40
|
Female
|
GTEX-139D8-1826 |
Spleen
|
PAXgene |
2
|
2 pieces; severe congestion
|
Acceptable
|
|
GTEX-139D8
|
21-40
|
Female
|
GTEX-139D8-1926 |
Pancreas
|
PAXgene |
2
|
2 pieces; 30% internal and external fat; islets not reduced in number
|
Acceptable
|
|
GTEX-139D8
|
21-40
|
Female
|
GTEX-139D8-2026 |
Liver
|
PAXgene |
2
|
2 pieces; severe central congestion; no underlying disease
|
Acceptable
|
|
GTEX-139D8
|
21-40
|
Female
|
GTEX-139D8-2226 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; no underlying chronic disease; tubules poorly preserved
|
Acceptable
|
|
GTEX-139D8
|
21-40
|
Female
|
GTEX-139D8-2326 |
Stomach
|
PAXgene |
2
|
6 pieces; mucosa moderately to severely autolyzed; well dissected
|
Acceptable
|
|
GTEX-139T4
|
51-60
|
Female
|
GTEX-139T4-0826 |
Pituitary gland
|
PAXgene |
2
|
1 piece; anterior
|
Acceptable
|
|
GTEX-139TS
|
61-70
|
Male
|
GTEX-139TS-0726 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; glomeruli in all sections, congestion, interstitial fibrosis and vascular thickening
|
Acceptable
|
|
GTEX-139TS
|
61-70
|
Male
|
GTEX-139TS-0826 |
Stomach
|
PAXgene |
2
|
6 pieces; muscularis and moderately autolyzed mucosa, few detached fragments of skeletal muscle
|
Acceptable
|
|
GTEX-139TS
|
61-70
|
Male
|
GTEX-139TS-1226 |
Pancreas
|
PAXgene |
2
|
2 pieces; one piece with 10-20% attached fat and nerve, mild to moderate autolysis, islets well visualized
|
Acceptable
|
|
GTEX-139TS
|
61-70
|
Male
|
GTEX-139TS-1526 |
Spleen
|
PAXgene |
2
|
2 pieces; congested
|
Acceptable
|
|
GTEX-139TS
|
61-70
|
Male
|
GTEX-139TS-1626 |
Ileum
|
PAXgene |
2
|
5 pieces; moderately autolyzed mucosa with several pieces with abundant lymphoid tissue
|
Acceptable
|
|
GTEX-139TS
|
61-70
|
Male
|
GTEX-139TS-1826 |
Prostate
|
PAXgene |
2
|
2 pieces; glands with sloughed epithelium and stroma
|
Acceptable
|
|
GTEX-139TS
|
61-70
|
Male
|
GTEX-139TS-1926 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; moderately autolyzed mucosa and muscularis
|
Acceptable
|
|
GTEX-139TT
|
51-60
|
Male
|
GTEX-139TT-0726 |
Lung
|
PAXgene |
2
|
2 pieces; 60% hemorrhage (consistent with pulmonary embolism); patchy fibrosis
|
Acceptable
|
|
GTEX-139TT
|
51-60
|
Male
|
GTEX-139TT-1326 |
Spleen
|
PAXgene |
2
|
2 pieces & fragments; severe congestion
|
Acceptable
|
|
GTEX-139TT
|
51-60
|
Male
|
GTEX-139TT-1526 |
Pancreas
|
PAXgene |
2
|
2 pieces; 1 piece has only 3 x 1.3mm pancreas, remainder fat; other piece is all fat; may be better for LCM [annotated]
|
Unacceptable
|
|
GTEX-139TT
|
51-60
|
Male
|
GTEX-139TT-1626 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; 5 and half of 6th are medulla; small cortex sample [annotated]
|
Unacceptable
|
|
GTEX-139TT
|
51-60
|
Male
|
GTEX-139TT-1726 |
Prostate
|
PAXgene |
2
|
2 pieces; 1 piece has autolyzed glands and preserved fibromuscular stroma; other is all fibromuscular stroma
|
Acceptable
|
|
GTEX-139TT
|
51-60
|
Male
|
GTEX-139TT-1826 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; 30 and 40% internal and external fat
|
Acceptable
|
|
GTEX-139TT
|
51-60
|
Male
|
GTEX-139TT-1926 |
Ileum
|
PAXgene |
2
|
6 pieces; 2 small lymphoid nodules [annotated] in autolyzed mucosa; muscularis (not target) in all; may be useful for LCM
|
Unacceptable
|
|
GTEX-139TT
|
51-60
|
Male
|
GTEX-139TT-2026 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; well dissected; mucosa poorly preserved, muscle better
|
Acceptable
|
|