GTEX-14PN4
|
51-60
|
Male
|
GTEX-14PN4-2926 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; all include residual moderately autolyzed mucosa (not target) and attached fat
|
Unacceptable
|
 |
GTEX-14PQA
|
51-60
|
Female
|
GTEX-14PQA-1626 |
Pancreas
|
PAXgene |
3
|
2 pieces; marked autolysis
|
Unacceptable
|
 |
GTEX-14PQA
|
51-60
|
Female
|
GTEX-14PQA-1826 |
Colon, transverse
|
PAXgene |
3
|
4 pieces; variable fragments including autolyzed mucosa and portion of muscularis
|
Unacceptable
|
 |
GTEX-14PQA
|
51-60
|
Female
|
GTEX-14PQA-2426 |
Ileum
|
PAXgene |
2
|
6 pieces; fragments of autolyzed mucosa (no lymphoid nodules) and muscularis
|
Unacceptable
|
 |
GTEX-15CHC
|
61-70
|
Female
|
GTEX-15CHC-1526 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; only muscularis propria, no mucosa (target)
|
Unacceptable
|
 |
GTEX-15CHC
|
61-70
|
Female
|
GTEX-15CHC-1726 |
Ileum
|
PAXgene |
1
|
6 pieces; only 1 has lymphoid tissue and it is a tiny, 1mm, focus; also is full thickness bowel wall (not target)
|
Unacceptable
|
 |
GTEX-15CHQ
|
61-70
|
Male
|
GTEX-15CHQ-2426 |
Ileum
|
PAXgene |
3
|
4 pieces; 1 very small lymphoid nodule [outlined]; mucosa autolyzed
|
Unacceptable
|
 |
GTEX-15CHR
|
51-60
|
Male
|
GTEX-15CHR-0826 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces; 3 are muscularis, 3 are mucosa with portion of muscularis
|
Unacceptable
|
 |
GTEX-15CHR
|
51-60
|
Male
|
GTEX-15CHR-1526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; 3 are full thickness (mucosa not target)
|
Unacceptable
|
 |
GTEX-15CHR
|
51-60
|
Male
|
GTEX-15CHR-1626 |
Ileum
|
PAXgene |
2
|
6 pieces; predominantly muscularis (not target) with autolyzed mucosa and only focal lymphoid elements
|
Unacceptable
|
 |
GTEX-15CHR
|
51-60
|
Male
|
GTEX-15CHR-1926 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; mucosa (not target), not muscularis
|
Unacceptable
|
 |
GTEX-15CHR
|
51-60
|
Male
|
GTEX-15CHR-2126 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; one is 70% salivary gland (circled) with focal acute inflammation/30% skeletal muscle and nerve, second is all lip, nerve, skeletal muscle and fat
|
Unacceptable
|
 |
GTEX-15D79
|
51-60
|
Male
|
GTEX-15D79-2726 |
Ileum
|
PAXgene |
3
|
4 pieces; abundant but autolyzed lymphoid tissue
|
Unacceptable
|
 |
GTEX-15DCD
|
61-70
|
Female
|
GTEX-15DCD-2426 |
Ileum
|
PAXgene |
3
|
4 pieces; autolyzed mucosa with some residual lymphoid aggregates ~30% of tissue
|
Unacceptable
|
 |
GTEX-15DCD
|
61-70
|
Female
|
GTEX-15DCD-2526 |
Stomach
|
PAXgene |
3
|
6 pieces; full thickness sections with moderate to severe mucosal autolysis, congestion, muscularis is moderatley autolyzed
|
Unacceptable
|
 |
GTEX-15DCD
|
61-70
|
Female
|
GTEX-15DCD-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; full thickness sections with moderate to severe mucosal autolysis
|
Unacceptable
|
 |
GTEX-15DCD
|
61-70
|
Female
|
GTEX-15DCD-2826 |
Brain - cerebellum
|
PAXgene |
3
|
4 pieces; fragmented and predominantly autolyzed
|
Unacceptable
|
 |
GTEX-15DCE
|
21-40
|
Male
|
GTEX-15DCE-0926 |
Coronary artery
|
PAXgene |
1
|
2 pieces; vein rather than artery
|
Unacceptable
|
 |
GTEX-15DCE
|
21-40
|
Male
|
GTEX-15DCE-1926 |
Ileum
|
PAXgene |
2
|
6 pieces: small lymphoid nodules in 5/6 pieces [labeled] LCM; all pieces have abundant muscularis propria
|
Unacceptable
|
 |
GTEX-15DCE
|
21-40
|
Male
|
GTEX-15DCE-2126 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces: all have mucosa, only 2 have muscle
|
Unacceptable
|
 |
GTEX-15DYW
|
61-70
|
Female
|
GTEX-15DYW-2526 |
Ileum
|
PAXgene |
3
|
4 fragmented pieces; little lymphoid tissue present; possible LCM
|
Unacceptable
|
 |
GTEX-15EO6
|
51-60
|
Male
|
GTEX-15EO6-1326 |
Adrenal glands
|
PAXgene |
3
|
2 pieces, no adrenal tissue evident, fibroadipose tissue with fat necrosis
|
Unacceptable
|
 |
GTEX-15EO6
|
51-60
|
Male
|
GTEX-15EO6-1726 |
Pancreas
|
PAXgene |
3
|
2 pieces, ~20% completely saponified pancreas, mainly fibroadipose tissue with fat necrosis
|
Unacceptable
|
 |
GTEX-15EO6
|
51-60
|
Male
|
GTEX-15EO6-2226 |
Ileum
|
PAXgene |
3
|
4 pieces, totally autolyzed, correct target but too few lymphoid aggregates to warrant analysis (~5%)
|
Unacceptable
|
 |
GTEX-15EOM
|
21-40
|
Female
|
GTEX-15EOM-1426 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; includes significant portion of medulla (30%), some sclerotic glomeruli
|
Unacceptable
|
 |