GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-2026 |
Pancreas
|
PAXgene |
1
|
2 pieces; PanIN 1A lesions in 1 labeled focus. 5% internal fat
|
Acceptable
|
 |
GTEX-1AYCT
|
51-60
|
Male
|
GTEX-1AYCT-0226 |
Thyroid gland
|
PAXgene |
0
|
2 pieces; one piece includes ~30% fat and connective tissue, attached portion of large vessel in second piece
|
Acceptable
|
 |
GTEX-1AYD5
|
51-60
|
Male
|
GTEX-1AYD5-0926 |
Esophagus - mucosa
|
PAXgene |
0
|
5 pieces; squamous mucosa and submucosal glands in 4 of 5 pieces (outlined); squamous epithelium ~0.35mm thick
|
Acceptable
|
 |
GTEX-1AYD5
|
51-60
|
Male
|
GTEX-1AYD5-1526 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa and scattered residual lymphoid aggregates in 4 of 6 pieces (rep. outlined); muscularis (not target) well preserved
|
Unacceptable
|
 |
GTEX-1AYD5
|
51-60
|
Male
|
GTEX-1AYD5-2726 |
Minor salivary glands
|
PAXgene |
0
|
2 pieces; salivary gland elements embedded in ~40-50% fibrovascular and fatty stroma, focal collection of chronic inflammatory cells
|
Acceptable
|
 |
GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-0426 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; 3 mm in diameter micronodule (outlined); focal interstitial fibrosis; a few lymphoid aggregates (arrowed)
|
Acceptable
|
 |
GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-0726 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; squamous epithelium ~345 to 414 um in thickness; well trimmed
|
Acceptable
|
 |
GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-1126 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa and lymphoid aggregates in 4 of 6 samples (arrows)
|
Acceptable
|
 |
GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-1426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis with preserved colonic mucosa in all pieces
|
Unacceptable
|
 |
GTEX-1B8SF
|
61-70
|
Male
|
GTEX-1B8SF-2426 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; glomeruli in all sections
|
Acceptable
|
 |
GTEX-1B932
|
41-50
|
Female
|
GTEX-1B932-1026 |
Heart
|
PAXgene |
1
|
2 pieces; fatty degeneration (disseminated fatty streaks in association with interstitial vessels); focal small inflammatory cell infiltrate (outlined)
|
Acceptable
|
 |
GTEX-1B996
|
61-70
|
Male
|
GTEX-1B996-1226 |
Omentum
|
PAXgene |
1
|
2 pieces; mature adipose tissue and small 1.6mm in diameter lymph node (outlined); ~5% fibrovascular component
|
Acceptable
|
 |
GTEX-1B996
|
61-70
|
Male
|
GTEX-1B996-1926 |
Stomach
|
PAXgene |
2
|
6 pieces; predominantly moderately autolyzed gastric mucosa with small foci of muscularis in 3 of 6 pieces; congestion
|
Acceptable
|
 |
GTEX-1B996
|
61-70
|
Male
|
GTEX-1B996-2126 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces; congestion, glomeruli in all sections
|
Acceptable
|
 |
GTEX-1B996
|
61-70
|
Male
|
GTEX-1B996-2726 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis with scant detached fragments of colonic glands in association with a few pieces (arrows)
|
Acceptable
|
 |
GTEX-1BAJH
|
61-70
|
Male
|
GTEX-1BAJH-1826 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces; glomeruli in all sections, mild arterio and arteriolonephrosclerosis with rare sclerotic glomeruli (rep outlined)
|
Acceptable
|
 |
GTEX-1BAJH
|
61-70
|
Male
|
GTEX-1BAJH-2826 |
Stomach
|
PAXgene |
2
|
6 pieces; moderately autolyzed gastric mucosa, muscularis slightly less autolyzed, 5 pieces are full thickness with only trivial muscularis in the 6th section
|
Acceptable
|
 |
GTEX-1C2JI
|
51-60
|
Male
|
GTEX-1C2JI-1026 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; some defects in tissue (? poor fixation), up to ~10% internal/external fat
|
Acceptable
|
 |
GTEX-1C475
|
41-50
|
Female
|
GTEX-1C475-0326 |
Omentum
|
PAXgene |
0
|
2 pieces; adipose tissue with few large vessels in 1 piece
|
Acceptable
|
 |
GTEX-1C475
|
41-50
|
Female
|
GTEX-1C475-0626 |
Uterus
|
PAXgene |
0
|
2 pieces; myometrium only in this section
|
Acceptable
|
 |
GTEX-1C475
|
41-50
|
Female
|
GTEX-1C475-1626 |
Colon, transverse
|
PAXgene |
0
|
6 pieces; predominantly mucosa and submucosa only with small portion of muscularis in 2 pieces
|
Acceptable
|
 |
GTEX-1C4CL
|
21-40
|
Male
|
GTEX-1C4CL-0926 |
Pancreas
|
PAXgene |
2
|
2 pieces, moderately advanced saponfication in some foci; Islets stiil visible ( rep encircled), beginning to degrade
|
Acceptable
|
 |
GTEX-1C6VQ
|
51-60
|
Male
|
GTEX-1C6VQ-0626 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; includes small portion of fat, up to 10% in 1 piece
|
Acceptable
|
 |
GTEX-1C6VQ
|
51-60
|
Male
|
GTEX-1C6VQ-2326 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; glomeruli in all sections, few sclerotic, arterionephrosclerosis
|
Acceptable
|
 |
GTEX-1C6VS
|
61-70
|
Male
|
GTEX-1C6VS-0826 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; variation in size of thyroid follicles; one 1.27mm in diameter nodule (outlined)
|
Acceptable
|
 |