GTEX-ZZPU
|
41-50
|
Female
|
GTEX-ZZPU-0326 |
Omentum
|
PAXgene |
0
|
2 pieces
|
Acceptable
|
|
GTEX-ZZPU
|
41-50
|
Female
|
GTEX-ZZPU-0426 |
Liver
|
PAXgene |
1
|
2 pieces, steatosis, sections include capsule (should be 1cm below capsule)
|
Acceptable
|
|
GTEX-ZZPU
|
41-50
|
Female
|
GTEX-ZZPU-0526 |
Lung
|
PAXgene |
0
|
2 pieces, numerous hemosiderin-laden macrophages, increased goblet cells and thickening of the basement membrane c/w history of asthma
|
Acceptable
|
|
GTEX-ZZPU
|
41-50
|
Female
|
GTEX-ZZPU-0626 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces, predominantly fat with ~10% fibrous stroma and few ductal elements
|
Acceptable
|
|
GTEX-ZZPU
|
41-50
|
Female
|
GTEX-ZZPU-0726 |
Pancreas
|
PAXgene |
1
|
2 pieces, 20-30% fat, focal PanIN-1, dilated ducts vs cyst
|
Acceptable
|
|
GTEX-ZZPU
|
41-50
|
Female
|
GTEX-ZZPU-0826 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, well trimmed
|
Acceptable
|
|
GTEX-ZZPU
|
41-50
|
Female
|
GTEX-ZZPU-0926 |
Heart
|
PAXgene |
1
|
2 pieces, 10-20% internal fat
|
Acceptable
|
|
GTEX-ZZPU
|
41-50
|
Female
|
GTEX-ZZPU-1026 |
Coronary artery
|
PAXgene |
1
|
2 pieces, both with significant attached fat up to 3.8mm, artery represents only 10% and 40% of tissue due to included adipose tissue
|
Acceptable
|
|
GTEX-ZZPU
|
41-50
|
Female
|
GTEX-ZZPU-1126 |
Atrial appendage
|
PAXgene |
0
|
2 pieces, 10-20% fat
|
Acceptable
|
|
GTEX-ZZPU
|
41-50
|
Female
|
GTEX-ZZPU-1226 |
Adrenal glands
|
PAXgene |
0
|
2 pieces
|
Acceptable
|
|
GTEX-ZZPU
|
41-50
|
Female
|
GTEX-ZZPU-1326 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, one piece includes ~20% fat, multinodular with some cystic change
|
Acceptable
|
|
GTEX-ZZPU
|
41-50
|
Female
|
GTEX-ZZPU-1426 |
Stomach
|
PAXgene |
1
|
6 pieces, 5 with mucosa and muscularis, 1 mucosa only
|
Acceptable
|
|
GTEX-ZZPU
|
41-50
|
Female
|
GTEX-ZZPU-1526 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, all include gastric mucosa (not target)
|
Unacceptable
|
|
GTEX-ZZPU
|
41-50
|
Female
|
GTEX-ZZPU-1626 |
Ileum
|
PAXgene |
1
|
6 pieces, colon, not ileum
|
Unacceptable
|
|
GTEX-ZZPU
|
41-50
|
Female
|
GTEX-ZZPU-1726 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, several pieces include muscularis (not target), submucosal glands (some delineated)
|
Unacceptable
|
|
GTEX-ZZPU
|
41-50
|
Female
|
GTEX-ZZPU-1826 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces, well trimmed
|
Acceptable
|
|
GTEX-ZZPU
|
41-50
|
Female
|
GTEX-ZZPU-1926 |
Colon, transverse
|
PAXgene |
0
|
6 pieces, extensive mucosal necrosis and hemorrhage c/w history of ulcerative colitis
|
Unacceptable
|
|
GTEX-ZZPU
|
41-50
|
Female
|
GTEX-ZZPU-2026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, multiple pieces include mucosa (not target), mucosa contains prominent lymphoid tissue (?ileum)
|
Unacceptable
|
|
GTEX-ZZPU
|
41-50
|
Female
|
GTEX-ZZPU-2126 |
Ovary
|
PAXgene |
0
|
2 pieces, few epithelial inclusion glands
|
Acceptable
|
|
GTEX-ZZPU
|
41-50
|
Female
|
GTEX-ZZPU-2226 |
Vagina
|
PAXgene |
0
|
6 pieces, only 2 pieces include squamous epithelium (5-10%)
|
Acceptable
|
|
GTEX-ZZPU
|
41-50
|
Female
|
GTEX-ZZPU-2326 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, significant attached and internal adipose tissue on both pieces (30-60%)
|
Acceptable
|
|
GTEX-ZZPU
|
41-50
|
Female
|
GTEX-ZZPU-2426 |
Artery - tibial
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
|
GTEX-ZZPU
|
41-50
|
Female
|
GTEX-ZZPU-2526 |
Skin, leg
|
PAXgene |
1
|
6 pieces, all with significant attached adipose tissue, likely 50+%, central holes (? poor fixation), squamous epithelium is 27 to 44 microns thick
|
Acceptable
|
|
GTEX-ZZPU
|
41-50
|
Female
|
GTEX-ZZPU-2626 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces, includes internal fat (up to 20%) and tendon
|
Acceptable
|
|
GTEX-ZZPU
|
41-50
|
Female
|
GTEX-ZZPU-2726 |
Adipose tissue
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
|