GTEX-1F75A
|
51-60
|
Male
|
GTEX-1F75A-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces glandular mucosa totally autolyzed, partallly sloughed, ~0.1mm
|
Acceptable
|
 |
GTEX-1F75B
|
51-60
|
Male
|
GTEX-1F75B-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; severely autolyzed mucosa, moderately autolyzed muscularis
|
Acceptable
|
 |
GTEX-1F75I
|
41-50
|
Male
|
GTEX-1F75I-2426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; focally moderate autolysis; superficial multifocal mucosal fresh hemorrhage (rep arrows)
|
Acceptable
|
 |
GTEX-1F75W
|
61-70
|
Male
|
GTEX-1F75W-2226 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; muscularis and submucosa without mucosa
|
Acceptable
|
 |
GTEX-1F88E
|
61-70
|
Female
|
GTEX-1F88E-2226 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, target mucosa up to ~0.15mm, glandular elements totally autolyzed
|
Acceptable
|
 |
GTEX-1F88F
|
61-70
|
Female
|
GTEX-1F88F-1926 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; autolyzed mucosa, muscle intact
|
Acceptable
|
 |
GTEX-1FIGZ
|
41-50
|
Male
|
GTEX-1FIGZ-1126 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; 1 of 6 includes portion of muscularis (not target)
|
Acceptable
|
 |
GTEX-1GF9U
|
41-50
|
Female
|
GTEX-1GF9U-1526 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; full thickness sections of colon
|
Acceptable
|
 |
GTEX-1GF9V
|
61-70
|
Male
|
GTEX-1GF9V-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, target mucosa up to ~0.25mm, totally autolyzed
|
Acceptable
|
 |
GTEX-1GF9W
|
61-70
|
Male
|
GTEX-1GF9W-2426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; predominantly muscularis and submucosa with small fragment of autolyzed mucosa (arrow)
|
Unacceptable
|
 |
GTEX-1GF9X
|
41-50
|
Female
|
GTEX-1GF9X-1526 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; only 2 have full thickness; 4 have mucosa only
|
Acceptable
|
 |
GTEX-1GL5R
|
51-60
|
Male
|
GTEX-1GL5R-2426 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; mucosa and muscularis, one piece includes ~50% fat, melanosis coli
|
Acceptable
|
 |
GTEX-1GMR2
|
51-60
|
Male
|
GTEX-1GMR2-1726 |
Colon, transverse
|
PAXgene |
1
|
2 pieces; muscularis and submucosa, no mucosa [could be used to compare to sigmoid colon]
|
Acceptable
|
 |
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-2826 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, target mucosa is ~0.5mm, ~20% thickness; deeper (basal) mucosa better preserved (score 1)
|
Acceptable
|
 |
GTEX-1GMR8
|
51-60
|
Female
|
GTEX-1GMR8-2826 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; mucosa autolyzed (3); muscularis intact
|
Acceptable
|
 |
GTEX-1GMRU
|
51-60
|
Male
|
GTEX-1GMRU-2826 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, mucosa up to ~0.4mm, ~20% thickness
|
Acceptable
|
 |
GTEX-1GN1U
|
51-60
|
Female
|
GTEX-1GN1U-2726 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, mucosa ~50% sloughed
|
Acceptable
|
 |
GTEX-1GN1V
|
61-70
|
Male
|
GTEX-1GN1V-2526 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; full thickness, autolyzed
|
Unacceptable
|
 |
GTEX-1GN1W
|
51-60
|
Female
|
GTEX-1GN1W-1726 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; muscularis only, no mucosa
|
Unacceptable
|
 |
GTEX-1GN2E
|
61-70
|
Male
|
GTEX-1GN2E-2626 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, glandular mucoca with advanced autolysis, partially sloughing, up to ~0.4mm
|
Acceptable
|
 |
GTEX-1GN73
|
61-70
|
Male
|
GTEX-1GN73-2626 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; largely autolyzed mucosa, intact muscularis
|
Acceptable
|
 |
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-1726 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; muscularis (target is full thickness) - can be compared to sigmoid colon specimen
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-2326 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, target mucosa with moderate-marked glandular autolysis
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; autolyzed mucosa with a few scattered lymphoid aggregates (outlined) and trace of preserved muscularis (arrows), largely fat/submucosa
|
Unacceptable
|
 |
GTEX-1GZ4H
|
41-50
|
Female
|
GTEX-1GZ4H-1226 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; no mucosa, only muscularis propria
|
Acceptable
|
 |