GTEX-139T6
|
41-50
|
Male
|
GTEX-139T6-1826 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, no atherosis, minimal adherent fibrous tissue, clean specimen
|
Acceptable
|
|
GTEX-139T6
|
41-50
|
Male
|
GTEX-139T6-1926 |
Skin, leg
|
PAXgene |
0
|
6 pieces, up to ~2mm adherent dermal fat, delineated; squamous epithelium is~30 microns
|
Acceptable
|
|
GTEX-139T6
|
41-50
|
Male
|
GTEX-139T6-2026 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces ~5-10% interstitial fat, delineated2
|
Acceptable
|
|
GTEX-139T6
|
41-50
|
Male
|
GTEX-139T6-2126 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, minimal fascia
|
Acceptable
|
|
GTEX-13FLV
|
41-50
|
Male
|
GTEX-13FLV-0126 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; well trimmed, minimal internal fat
|
Acceptable
|
|
GTEX-13FLV
|
41-50
|
Male
|
GTEX-13FLV-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; 5-10% of one piece is fat/vessels
|
Acceptable
|
|
GTEX-13FLV
|
41-50
|
Male
|
GTEX-13FLV-0326 |
Liver
|
PAXgene |
1
|
2 pieces; includes portion of capsule (target is 1 cm below capsule), mild steatosis, passive congestion, focal portal chronic inflammation
|
Acceptable
|
|
GTEX-13FLV
|
41-50
|
Male
|
GTEX-13FLV-0426 |
Lung
|
PAXgene |
1
|
2 pieces; hemosiderin-laden macrophages, anthracotic pigment, edema
|
Acceptable
|
|
GTEX-13FLV
|
41-50
|
Male
|
GTEX-13FLV-0526 |
Spleen
|
PAXgene |
1
|
2 pieces; congested
|
Acceptable
|
|
GTEX-13FLV
|
41-50
|
Male
|
GTEX-13FLV-0626 |
Pancreas
|
PAXgene |
1
|
2 pieces; interlobular and acinar fibrosis, islets visualized, some atrophy, sloughing of ductal epithelium with ?PanIN, 5-15% is fat/fibrous
|
Acceptable
|
|
GTEX-13FLV
|
41-50
|
Male
|
GTEX-13FLV-0726 |
Omentum
|
PAXgene |
0
|
2 pieces
|
Acceptable
|
|
GTEX-13FLV
|
41-50
|
Male
|
GTEX-13FLV-0826 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces; glomeruli in all sections, increased mesangial matirx and rare sclerotic glomerulus, some vascular thickening, interstitial and periglomerular fibrosis
|
Acceptable
|
|
GTEX-13FLV
|
41-50
|
Male
|
GTEX-13FLV-0926 |
Heart
|
PAXgene |
1
|
2 pieces; 10-15% internal fat, interstitial fibrosis
|
Acceptable
|
|
GTEX-13FLV
|
41-50
|
Male
|
GTEX-13FLV-1026 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; one piece is nearly entierly fibrous, second is 70% fibrous and fatty
|
Unacceptable
|
|
GTEX-13FLV
|
41-50
|
Male
|
GTEX-13FLV-1126 |
Esophagus - mucosa
|
PAXgene |
0
|
4 pieces
|
Acceptable
|
|
GTEX-13FLV
|
41-50
|
Male
|
GTEX-13FLV-1226 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces; well trimmed
|
Acceptable
|
|
GTEX-13FLV
|
41-50
|
Male
|
GTEX-13FLV-1326 |
Gastroesophageal junction
|
PAXgene |
1
|
5 pieces; well trimmed
|
Acceptable
|
|
GTEX-13FLV
|
41-50
|
Male
|
GTEX-13FLV-1426 |
Aorta
|
PAXgene |
1
|
6 pieces; atherosclerosis
|
Acceptable
|
|
GTEX-13FLV
|
41-50
|
Male
|
GTEX-13FLV-1526 |
Adrenal glands
|
PAXgene |
1
|
2 pieces; cortex and medulla, small strip of attached adipose tissue (~10% of one piece), mild to moderate autolysis
|
Acceptable
|
|
GTEX-13FLV
|
41-50
|
Male
|
GTEX-13FLV-1626 |
Stomach
|
PAXgene |
2
|
6 pieces; 5 of 6 include mucosa and muscularis, last is mucosa only, autolysis of superficial (foveolar) glands
|
Acceptable
|
|
GTEX-13FLV
|
41-50
|
Male
|
GTEX-13FLV-1726 |
Prostate
|
PAXgene |
0
|
2 pieces; good distribution of stroma and glands with small focus of skeletal muscle and nerve at periphery of one piece
|
Acceptable
|
|
GTEX-13FLV
|
41-50
|
Male
|
GTEX-13FLV-1826 |
Ileum
|
PAXgene |
3
|
5 pieces; predominantly moderately and severely autolyzed mucosa with only minimal lymphoid tissue and few foci of muscularis (not target)
|
Unacceptable
|
|
GTEX-13FLV
|
41-50
|
Male
|
GTEX-13FLV-1926 |
Testis
|
PAXgene |
2
|
2 pieces; spermatogenesis is present, some seminiferous tubules are hyalinized
|
Acceptable
|
|
GTEX-13FLV
|
41-50
|
Male
|
GTEX-13FLV-2026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; predominantly well trimmed, but one piece has ~15% fat attached
|
Acceptable
|
|
GTEX-13FLV
|
41-50
|
Male
|
GTEX-13FLV-2126 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces (fragmented); dense fibrous stroma and ducts with features of gynecomastia
|
Acceptable
|
|