GTEX-1HCVE
|
51-60
|
Male
|
GTEX-1HCVE-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, interstitial fat/vascular elements are 10-20% of tissue, rep delineated
|
Acceptable
|
|
GTEX-1HCVE
|
51-60
|
Male
|
GTEX-1HCVE-0426 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces; interstitial fat is ~10% of tissue, delineated
|
Acceptable
|
|
GTEX-1HCVE
|
51-60
|
Male
|
GTEX-1HCVE-0526 |
Artery - tibial
|
PAXgene |
0
|
2 pieces; no adherent fat or significant atherosis
|
Acceptable
|
|
GTEX-1HCVE
|
51-60
|
Male
|
GTEX-1HCVE-0626 |
Lung
|
PAXgene |
1
|
2 pieces, moderate congestion
|
Acceptable
|
|
GTEX-1HCVE
|
51-60
|
Male
|
GTEX-1HCVE-0726 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, mild goitrous changes
|
Acceptable
|
|
GTEX-1HCVE
|
51-60
|
Male
|
GTEX-1HCVE-0826 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1HCVE
|
51-60
|
Male
|
GTEX-1HCVE-0926 |
Coronary artery
|
PAXgene |
1
|
2 pieces, no atherosis
|
Acceptable
|
|
GTEX-1HCVE
|
51-60
|
Male
|
GTEX-1HCVE-1026 |
Aorta
|
PAXgene |
1
|
6 pieces atherosis up to ~1.2mm, focally calcified (rep delineated)
|
Acceptable
|
|
GTEX-1HCVE
|
51-60
|
Male
|
GTEX-1HCVE-1126 |
Heart
|
PAXgene |
1
|
2 pieces, moderate interstitial fibrosis/chronic ischemic change
|
Acceptable
|
|
GTEX-1HCVE
|
51-60
|
Male
|
GTEX-1HCVE-1226 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; squamous mucosa is ~0.5mm, ~50-60% thickness. A few submucosal mucus glands present, rep. delineated
|
Acceptable
|
|
GTEX-1HCVE
|
51-60
|
Male
|
GTEX-1HCVE-1326 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1HCVE
|
51-60
|
Male
|
GTEX-1HCVE-1426 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1HCVE
|
51-60
|
Male
|
GTEX-1HCVE-1526 |
Liver
|
PAXgene |
1
|
2 pieces, marked passive congestion; moderate macrovesicular steatosis ( 40-50% of parenchyma)
|
Acceptable
|
|
GTEX-1HCVE
|
51-60
|
Male
|
GTEX-1HCVE-1626 |
Spleen
|
PAXgene |
2
|
2 pieces, marked congestion
|
Acceptable
|
|
GTEX-1HCVE
|
51-60
|
Male
|
GTEX-1HCVE-1726 |
Pancreas
|
PAXgene |
3
|
2 pieces, saponification moderate-markedly advanced; Islets not visible
|
Acceptable
|
|
GTEX-1HCVE
|
51-60
|
Male
|
GTEX-1HCVE-1826 |
Stomach
|
PAXgene |
2
|
6 pieces, mucosa up to ~1mm, 40-60% of thickness
|
Acceptable
|
|
GTEX-1HCVE
|
51-60
|
Male
|
GTEX-1HCVE-1926 |
Omentum
|
PAXgene |
1
|
2 pieces, trace fascia
|
Acceptable
|
|
GTEX-1HCVE
|
51-60
|
Male
|
GTEX-1HCVE-2026 |
Adrenal glands
|
PAXgene |
3
|
2 pieces, cortex, advanced autolysis, ~30-40% adherent/interstitial fat (delineated)
|
Acceptable
|
|
GTEX-1HCVE
|
51-60
|
Male
|
GTEX-1HCVE-2126 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, glomeruli present, tubules with moderated advanced autolysis
|
Acceptable
|
|
GTEX-1HCVE
|
51-60
|
Male
|
GTEX-1HCVE-2226 |
Prostate
|
PAXgene |
2
|
2 pieces, ~6x2mm focus infiltrating adencarcinoma (by pattern) glandular elements moderately -markedly autolyzed. Case reviewed by all PRC pathologists with concurrence.
|
Unacceptable
|
|
GTEX-1HCVE
|
51-60
|
Male
|
GTEX-1HCVE-2326 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed muscularis
|
Acceptable
|
|
GTEX-1HCVE
|
51-60
|
Male
|
GTEX-1HCVE-2426 |
Ileum
|
PAXgene |
3
|
4 pieces, advanced autolysis; correct site but insufficient target lymphoid aggregates (<5%)
|
Unacceptable
|
|
GTEX-1HCVE
|
51-60
|
Male
|
GTEX-1HCVE-2526 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa up to ~-.3mm, advanced autolysis, glandular elements sloughed
|
Acceptable
|
|
GTEX-1HCVE
|
51-60
|
Male
|
GTEX-1HCVE-2626 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces, adipose elements only
|
Acceptable
|
|
GTEX-1HCVE
|
51-60
|
Male
|
GTEX-1HCVE-2726 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, no dermal fat; squamous epithelium is ~30-40 microns
|
Acceptable
|
|