GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-1026 |
Spleen
|
PAXgene |
0
|
2 pieces
|
Acceptable
|
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-1126 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, predominantly well trimmed, few pieces with minimal attached adipose tissue
|
Acceptable
|
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-1226 |
Omentum
|
PAXgene |
1
|
2 pieces, not atrial appendage as originally labeled; adipose tissue,with central defects (? incomplete fixation), tissue exceeds recommended size
|
Acceptable
|
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-1326 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces, well trimmed
|
Acceptable
|
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-1426 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, all with mucosa, focal chronic inflammation
|
Acceptable
|
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-1526 |
Gastroesophageal junction
|
PAXgene |
0
|
6 pieces, well trimmed
|
Acceptable
|
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-1626 |
Stomach
|
PAXgene |
1
|
6 pieces, all with mucosa
|
Acceptable
|
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-1726 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, two with small attachment of mucosa (not target)
|
Acceptable
|
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-1826 |
Ileum
|
PAXgene |
1
|
6 pieces, two with abundant mucosal lymphoid tissue , other with ileocecal mucosa with focal lymphoid aggregates, all also have abundant muscularis (not target)
|
Acceptable
|
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-1926 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, all with mucosa (2) and muscularis (1)
|
Acceptable
|
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-2026 |
Prostate
|
PAXgene |
1
|
2 pieces, epithelium largely sloughed in one piece with dilated glands
|
Acceptable
|
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-2126 |
Testis
|
PAXgene |
1
|
2 pieces, active spermatogenesis, some vascular thickening and tubular hyalinization
|
Acceptable
|
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-2226 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces, adipose tissue with ~5% fibrous tissue, no ductal elements identified
|
Acceptable
|
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-2326 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces, chronically inflamed salivary gland comprises only ~5% of total tissue (delineated), rest is predominantly mucosa and stroma
|
Acceptable
|
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-2426 |
Adipose tissue
|
PAXgene |
1
|
3 pieces, scant fibrous tissue, central defect (? incomplete fixation)
|
Acceptable
|
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-2526 |
Skin, leg
|
PAXgene |
0
|
6 pieces, up to 10% attached and internal adipose tissue, squamous epithelium is 50 to 75 microns thick
|
Acceptable
|
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-2626 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, minimal internal adipose tissue
|
Acceptable
|
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-2726 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, not nerve as originally labeled; well trimmed artery with medial calcific sclerosis
|
Acceptable
|
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-2826 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces, not artery as originally labeled; nerve with some internal and up to 1.3mm attached adipose tissue
|
Acceptable
|
|
GTEX-ZT9X
|
41-50
|
Male
|
GTEX-ZT9X-0126 |
Adrenal glands
|
PAXgene |
1
|
2 pieces, all cortex, ~1-1.5mm rim of adherent fat on one aliquot, delineated
|
Acceptable
|
|
GTEX-ZT9X
|
41-50
|
Male
|
GTEX-ZT9X-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, regressive changes/scarring
|
Acceptable
|
|
GTEX-ZT9X
|
41-50
|
Male
|
GTEX-ZT9X-0326 |
Lung
|
PAXgene |
1
|
2 pieces, diffuse acute pneumonia, aggregates of polymorphonuclear leukcytes are abundant; rep. foci delineated
|
Acceptable
|
|
GTEX-ZT9X
|
41-50
|
Male
|
GTEX-ZT9X-0426 |
Pancreas
|
PAXgene |
1
|
2 pieces, extremely well-preserved; Islets well- visualized; rep. ones delineated
|
Acceptable
|
|
GTEX-ZT9X
|
41-50
|
Male
|
GTEX-ZT9X-0526 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa well preserved, ~20-25% thickness. Incidental mucous glands present, rep ones delineated
|
Acceptable
|
|
GTEX-ZT9X
|
41-50
|
Male
|
GTEX-ZT9X-0626 |
Esophagus - muscularis
|
PAXgene |
1
|
5 pieces, all muscularis
|
Acceptable
|
|