GTEX-XMD2
|
61-70
|
Female
|
GTEX-XMD2-1426 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces, up to 8x4mm; well trimmed muscularis
|
Acceptable
|
|
GTEX-XMD2
|
61-70
|
Female
|
GTEX-XMD2-1626 |
Liver
|
PAXgene |
2
|
2 pieces, 8x7 & 7.5x7mm; moderate central congestion and atrophy; no fibrosis or fat
|
Acceptable
|
|
GTEX-XMD2
|
61-70
|
Female
|
GTEX-XMD2-1726 |
Pancreas
|
PAXgene |
2
|
2 pieces, 10x7 & 9x8mm; <5% internal adipose
|
Acceptable
|
|
GTEX-XMD2
|
61-70
|
Female
|
GTEX-XMD2-1826 |
Spleen
|
PAXgene |
2
|
2 pieces, 7x7 & 8x7mm; congested
|
Acceptable
|
|
GTEX-XMD2
|
61-70
|
Female
|
GTEX-XMD2-1926 |
Adrenal glands
|
PAXgene |
2
|
2 pieces, 10x6 & 10x6mm; 10% peripheral adipose
|
Acceptable
|
|
GTEX-XMD2
|
61-70
|
Female
|
GTEX-XMD2-2026 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, up to 8x2mm; all are cortex; moderate glomerular and arteriolar sclerosis;
|
Acceptable
|
|
GTEX-XMD2
|
61-70
|
Female
|
GTEX-XMD2-2226 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces, up to 8x5mm; all muscle (good)
|
Acceptable
|
|
GTEX-XMD2
|
61-70
|
Female
|
GTEX-XMD2-2326 |
Ileum
|
PAXgene |
2
|
4 pieces, up to 5.5x5mm; numerous lymphoid nodules (good) (=2) annotated; mucosa =3
|
Acceptable
|
|
GTEX-XMD3
|
51-60
|
Female
|
GTEX-XMD3-0626 |
Thyroid gland
|
PAXgene |
2
|
2 pieces. 8x8 & 9x8mm;
|
Acceptable
|
|
GTEX-XMD3
|
51-60
|
Female
|
GTEX-XMD3-0826 |
Lung
|
PAXgene |
2
|
2 pieces. 9x6.5 & 8x7mm; emphysema, patchy fibrosis, congestion
|
Acceptable
|
|
GTEX-XMD3
|
51-60
|
Female
|
GTEX-XMD3-0926 |
Coronary artery
|
PAXgene |
2
|
2 pieces. 3x2 7 4x2mm; 2 mm artery severely occluded by atheromatous plaque; 1 mm untrimmed adipose at each end
|
Acceptable
|
|
GTEX-XMD3
|
51-60
|
Female
|
GTEX-XMD3-1326 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces. up to 7x2mm; well dissected mucosa
|
Acceptable
|
|
GTEX-XMD3
|
51-60
|
Female
|
GTEX-XMD3-1426 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces. up to 8x3.5mm; well trimmed muscle
|
Acceptable
|
|
GTEX-XMD3
|
51-60
|
Female
|
GTEX-XMD3-1626 |
Liver
|
PAXgene |
2
|
2 pieces. 8x8 & 8x7mm; moderate central congestion
|
Acceptable
|
|
GTEX-XMD3
|
51-60
|
Female
|
GTEX-XMD3-1826 |
Adrenal glands
|
PAXgene |
2
|
2 pieces. 10x4 & 13x4mm; autolysis varies from 2-3; 20% external adipose
|
Acceptable
|
|
GTEX-XMD3
|
51-60
|
Female
|
GTEX-XMD3-2026 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces. up to 7x3mm; tubules 2-3; all cortex; no notable chronic glomerular or vascular lesions
|
Acceptable
|
|
GTEX-XMD3
|
51-60
|
Female
|
GTEX-XMD3-2226 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces. up to 10x4mm; well trimmed, all muscularis propria
|
Acceptable
|
|
GTEX-XMD3
|
51-60
|
Female
|
GTEX-XMD3-2526 |
Vagina
|
PAXgene |
2
|
6 pieces. up to 7x3mm; largely sloughed epithelium
|
Acceptable
|
|
GTEX-XMD3
|
51-60
|
Female
|
GTEX-XMD3-2626 |
Skin, suprapubic
|
PAXgene |
2
|
6 pieces. up to 7x3mm; up to 1 mm subcutaneous adipose
|
Acceptable
|
|
GTEX-XMD3
|
51-60
|
Female
|
GTEX-XMD3-2726 |
Ileum
|
PAXgene |
2
|
4 pieces. up to 8x5mm; small amount of lymphoid tissue collected (annotated); extraneous muscle also collected
|
Acceptable
|
|
GTEX-XMD3
|
51-60
|
Female
|
GTEX-XMD3-2926 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces. up to 8x4mm; muscularis and submucosal stroma
|
Acceptable
|
|
GTEX-XMK1
|
41-50
|
Male
|
GTEX-XMK1-1826 |
Ileum
|
PAXgene |
2
|
6 pieces. up to 10x8mm abundant lymphoid elements, ~40% total
|
Acceptable
|
|
GTEX-XOT4
|
61-70
|
Female
|
GTEX-XOT4-0926 |
Liver
|
PAXgene |
2
|
2 pieces. 8x7 & 7x7mm; <5% macrovesicular steatosis
|
Acceptable
|
|
GTEX-XOT4
|
61-70
|
Female
|
GTEX-XOT4-1026 |
Spleen
|
PAXgene |
2
|
2 pieces. 8x8 & 8.5x8mm; congested
|
Acceptable
|
|
GTEX-XOT4
|
61-70
|
Female
|
GTEX-XOT4-1226 |
Pancreas
|
PAXgene |
2
|
2 pieces. 10.5x8 & 9x8mm; 20% internal adipose
|
Acceptable
|
|