GTEX-1H3VY
|
51-60
|
Male
|
GTEX-1H3VY-1626 |
Pancreas
|
PAXgene |
1
|
2 pieces; largely fat and incidental lymph node with ~30% pancreatic parenchyma, some fibrosis and atrophy
|
Acceptable
|
|
GTEX-1H3VY
|
51-60
|
Male
|
GTEX-1H3VY-1726 |
Omentum
|
PAXgene |
0
|
2 pieces; lobulated fat with up to 10-20% fibrous component
|
Acceptable
|
|
GTEX-1H3VY
|
51-60
|
Male
|
GTEX-1H3VY-1826 |
Adrenal glands
|
PAXgene |
1
|
2 pieces; include 20 and 40% attached fat, adrenal cortex and medulla
|
Acceptable
|
|
GTEX-1H3VY
|
51-60
|
Male
|
GTEX-1H3VY-1926 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces; glomeruli in all sections, some vascular thickening
|
Acceptable
|
|
GTEX-1H3VY
|
51-60
|
Male
|
GTEX-1H3VY-2026 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; erosive esophagitis, fungal organisms present
|
Acceptable
|
|
GTEX-1H3VY
|
51-60
|
Male
|
GTEX-1H3VY-2126 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces; target muscularis
|
Acceptable
|
|
GTEX-1H3VY
|
51-60
|
Male
|
GTEX-1H3VY-2226 |
Gastroesophageal junction
|
PAXgene |
0
|
6 pieces; muscularis, includes residual fat/fibrous/vascular tissue
|
Acceptable
|
|
GTEX-1H3VY
|
51-60
|
Male
|
GTEX-1H3VY-2326 |
Stomach
|
PAXgene |
1
|
6 pieces; mucosa and muscularis
|
Acceptable
|
|
GTEX-1H3VY
|
51-60
|
Male
|
GTEX-1H3VY-2426 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; full thickness sections
|
Acceptable
|
|
GTEX-1H3VY
|
51-60
|
Male
|
GTEX-1H3VY-2526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis
|
Acceptable
|
|
GTEX-1H3VY
|
51-60
|
Male
|
GTEX-1H3VY-2626 |
Testis
|
PAXgene |
1
|
2 pieces; spermatogenesis present
|
Acceptable
|
|
GTEX-1H3VY
|
51-60
|
Male
|
GTEX-1H3VY-2726 |
Prostate
|
PAXgene |
2
|
2 pieces; fibromuscular stroma and glands with predominantly sloughed epithelium
|
Acceptable
|
|
GTEX-1H3VY
|
51-60
|
Male
|
GTEX-1H3VY-2826 |
Ileum
|
PAXgene |
2
|
6 pieces; full thickness sections (muscularis not target) with partially autolyzed mucosa, rare lymphoid aggregate
|
Unacceptable
|
|
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-0126 |
Lung
|
PAXgene |
2
|
2 pieces; collapse, some fibrosis, pulmonary macrophages, some congestion, sloughed bronchial epithelium
|
Acceptable
|
|
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; large central defects (? poor fixation), smaller piece includes ~10-20% fibrous tissue
|
Acceptable
|
|
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-0326 |
Omentum
|
PAXgene |
1
|
2 pieces; lobulated adipose tissue, small central defects
|
Acceptable
|
|
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-0426 |
Aorta
|
PAXgene |
2
|
6 pieces; atherosclerosis
|
Acceptable
|
|
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-0526 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces; 3 are muscularis, 3 are mucosa (not target)
|
Unacceptable
|
|
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-0626 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; fragmented sections, small component of internal fat/vessels
|
Acceptable
|
|
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-0726 |
Skin, leg
|
PAXgene |
1
|
6 pieces; include up to 10% internal/external fat, epidermis measures 45 microns, some sections fragmented
|
Acceptable
|
|
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-0826 |
Artery - tibial
|
PAXgene |
2
|
2 pieces; one includes attached portion of vein/fat; mild, focal plaque
|
Acceptable
|
|
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-0926 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; predominantly target muscularis, small amount of residual fat/vessels and detached squamous epithelial cells
|
Acceptable
|
|
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-1026 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; 1 is 30% fat, 2nd is ~90% fat/vessels
|
Acceptable
|
|
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-1126 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces; epithelium is partially sloughed, few clusters of submucosal glands
|
Acceptable
|
|
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-1226 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; full thickness sections, mucosa autolyzed (3), muscularis (2)
|
Unacceptable
|
|