GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-1926 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; autolyzed mucosa and preserved muscularis on 3 of 6 samples (arrows)
|
Acceptable
|
|
GTEX-1CAMR
|
21-40
|
Male
|
GTEX-1CAMR-0926 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, mucosa well- preserved up to ~0.5-1mm
|
Acceptable
|
|
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-2526 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; grade 1 to 2 autolysed colonic mucosa; irregularly distributed lymphoid aggregates; 3 of 6 samples contain muscularis (outlined)
|
Acceptable
|
|
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-1826 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; mucosal autolysis varies from moderate to severe; muscularis well preserved
|
Acceptable
|
|
GTEX-1CB4E
|
61-70
|
Male
|
GTEX-1CB4E-1526 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; contains only muscularis propria and submucosa, NO mucosa present
|
Unacceptable
|
|
GTEX-1CB4F
|
61-70
|
Male
|
GTEX-1CB4F-2026 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; variably autolyzed mucosa with some melanosis coli/pigmented macrophages, muscularis also present
|
Acceptable
|
|
GTEX-1CB4G
|
51-60
|
Male
|
GTEX-1CB4G-2826 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, target mucosa with advanced glandular autolysis, up to ~0.3mm thick
|
Acceptable
|
|
GTEX-1CB4H
|
61-70
|
Female
|
GTEX-1CB4H-2126 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; glands totally autolyzed, remainder of wall intact
|
Acceptable
|
|
GTEX-1CB4I
|
51-60
|
Male
|
GTEX-1CB4I-2226 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mucosa autolyzed, muscle intact
|
Acceptable
|
|
GTEX-1CB4J
|
61-70
|
Male
|
GTEX-1CB4J-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa with advanced autolysis, largely sloughed
|
Acceptable
|
|
GTEX-1E1VI
|
51-60
|
Male
|
GTEX-1E1VI-2426 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; severely autolyzed mucosa, small portion of muscularis also present (less autolyzed)
|
Unacceptable
|
|
GTEX-1E2YA
|
51-60
|
Male
|
GTEX-1E2YA-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucusa up to ~0.2mm, completely autolyzed/sloughing
|
Acceptable
|
|
GTEX-1EH9U
|
61-70
|
Male
|
GTEX-1EH9U-2026 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; mucosa autolyzed, muscle intact
|
Acceptable
|
|
GTEX-1EKGG
|
61-70
|
Male
|
GTEX-1EKGG-2526 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mostly autolyzed mucosa, some muscularis
|
Unacceptable
|
|
GTEX-1EMGI
|
61-70
|
Male
|
GTEX-1EMGI-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, target mucusa with advanced autolysis, largely sloughed
|
Acceptable
|
|
GTEX-1EN7A
|
41-50
|
Male
|
GTEX-1EN7A-2626 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; autolyzed mucosa, intact muscularis
|
Acceptable
|
|
GTEX-1EU9M
|
61-70
|
Male
|
GTEX-1EU9M-2226 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, mucosa is ~0.3mm, ~40-50% thickness
|
Acceptable
|
|
GTEX-1EWIQ
|
61-70
|
Female
|
GTEX-1EWIQ-2926 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; predominantly muscularis, few residual strips of autolyzed mucosa
|
Unacceptable
|
|
GTEX-1EX96
|
51-60
|
Male
|
GTEX-1EX96-2026 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, target mucosa markedly autolyzed
|
Acceptable
|
|
GTEX-1F52S
|
61-70
|
Female
|
GTEX-1F52S-2626 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; totally autolyzed mucosa; intact muscularis
|
Acceptable
|
|
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-1926 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; foci of edematous, amyloid-like stroma or fibroelastosis in submucosa of 2 pieces, measuring up to 3x1mm, [labeled] like in sigmoid colon; no sign of amyloid in other tissues
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-2126 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, target mucosa up to ~ 0.5mm, ~10-15% thickness
|
Acceptable
|
|
GTEX-1F6I4
|
51-60
|
Male
|
GTEX-1F6I4-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; autolyzed mucosa and muscularis
|
Acceptable
|
|
GTEX-1F6IF
|
61-70
|
Male
|
GTEX-1F6IF-1226 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa up to ~0.15mm, glandular mucosa totally autolyzed
|
Acceptable
|
|
GTEX-1F6RS
|
61-70
|
Female
|
GTEX-1F6RS-2526 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; mucosa=2-3; muscularis=1-2
|
Acceptable
|
|