GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis and up to 1.5mm submucosa; scattered insignificant fragmented colonic glands (outlined)
|
Acceptable
|
|
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-2026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; 5 of 6 have mucosa as well as muscularis
|
Acceptable
|
|
GTEX-1CB4E
|
61-70
|
Male
|
GTEX-1CB4E-1626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; contains mucosa as well as muscularis in 3 of 6 pieces; may have been switched with transverse colon
|
Unacceptable
|
|
GTEX-1CB4F
|
61-70
|
Male
|
GTEX-1CB4F-1926 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis, well trimmed with minimal attached fat
|
Acceptable
|
|
GTEX-1CB4G
|
51-60
|
Male
|
GTEX-1CB4G-2726 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1CB4H
|
61-70
|
Female
|
GTEX-1CB4H-2326 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; muscularis propria with varying amounts of fibrofatty stroma
|
Acceptable
|
|
GTEX-1CB4I
|
51-60
|
Male
|
GTEX-1CB4I-1926 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; all contain mucosa; muscle intact LCM
|
Unacceptable
|
|
GTEX-1CB4J
|
61-70
|
Male
|
GTEX-1CB4J-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1E1VI
|
51-60
|
Male
|
GTEX-1E1VI-2526 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; muscularis with residual mucosa/lymphoid elements, too much contaminating tissue
|
Unacceptable
|
|
GTEX-1E2YA
|
51-60
|
Male
|
GTEX-1E2YA-2526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis, minute nubbin of autolyzed mucosa delineated
|
Acceptable
|
|
GTEX-1EH9U
|
61-70
|
Male
|
GTEX-1EH9U-1926 |
Colon, sigmoid
|
PAXgene |
1
|
5 pieces: 2 with 20 & 30% autolyzed mucosa & submucosa; ample muscle
|
Acceptable
|
|
GTEX-1EKGG
|
61-70
|
Male
|
GTEX-1EKGG-2326 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis, some residual attached fat/vessels, portion of autolyzed mucosa
|
Acceptable
|
|
GTEX-1EMGI
|
61-70
|
Male
|
GTEX-1EMGI-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1EN7A
|
41-50
|
Male
|
GTEX-1EN7A-2826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; fibrous subucosa occupies 50% of samples [labeled]
|
Acceptable
|
|
GTEX-1EU9M
|
61-70
|
Male
|
GTEX-1EU9M-2726 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis; few ~3mm nubbins of adherent fat/mucoid debris, rep delineated
|
Acceptable
|
|
GTEX-1EWIQ
|
61-70
|
Female
|
GTEX-1EWIQ-2826 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; full thickness sections of colon, mucosa largely autolyzed
|
Unacceptable
|
|
GTEX-1EX96
|
51-60
|
Male
|
GTEX-1EX96-1926 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1F52S
|
61-70
|
Female
|
GTEX-1F52S-2726 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; up to 40% submucosal fibroadipose tissue
|
Acceptable
|
|
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-1726 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; 3 pieces have mucosa as well as muscularis; foci of edematous, amyloid-like stroma or fibroelastosis in submucosa of 3 pieces [circled] (as in transverse colon)
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-1926 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis; adherent nubbins of fat, 1-2mm, rep delineated
|
Acceptable
|
|
GTEX-1F6I4
|
51-60
|
Male
|
GTEX-1F6I4-2826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis
|
Acceptable
|
|
GTEX-1F6IF
|
61-70
|
Male
|
GTEX-1F6IF-1326 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1F6RS
|
61-70
|
Female
|
GTEX-1F6RS-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; residual autolyzed mucosa on several pieces
|
Acceptable
|
|
GTEX-1F75A
|
51-60
|
Male
|
GTEX-1F75A-2526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis; inidental lymph node encircled
|
Acceptable
|
|
GTEX-1F75B
|
51-60
|
Male
|
GTEX-1F75B-2826 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; essentially well trimmed target muscularis
|
Acceptable
|
|