GTEX-13SLW
|
61-70
|
Male
|
GTEX-13SLW-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa ~10% thickness but totally autolyzed
|
Acceptable
|
|
GTEX-13SLX
|
51-60
|
Female
|
GTEX-13SLX-1326 |
Pancreas
|
PAXgene |
3
|
2 pieces; moderate to severe autolysis, sparsely scattered islets
|
Acceptable
|
|
GTEX-13SLX
|
51-60
|
Female
|
GTEX-13SLX-2826 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; full thickness sections, moderate to severe autolysis
|
Acceptable
|
|
GTEX-13U4I
|
41-50
|
Female
|
GTEX-13U4I-2326 |
Ileum
|
PAXgene |
3
|
6 pieces, glandular mucosa autolyzed/sloughed. Lymphoid cells diffuse through lamina propria; foci delineated
|
Acceptable
|
|
GTEX-13VXT
|
21-40
|
Female
|
GTEX-13VXT-2326 |
Stomach
|
PAXgene |
3
|
6 pieces; mucosa autolyzed, muscularis preserved
|
Acceptable
|
|
GTEX-13VXT
|
21-40
|
Female
|
GTEX-13VXT-2426 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; autolyzed mucosa, preserved muscle & submucosa
|
Acceptable
|
|
GTEX-13VXT
|
21-40
|
Female
|
GTEX-13VXT-2626 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces; mucosa (not muscularis); all have total autolysis of epithelium. Submucosa & muscularis mucosae preserved; LCM possible.
|
Acceptable
|
|
GTEX-13VXU
|
51-60
|
Male
|
GTEX-13VXU-1726 |
Ileum
|
PAXgene |
3
|
6 pieces; small amount of partly autolyzed lymphoid tissue. LCM
|
Unacceptable
|
|
GTEX-13VXU
|
51-60
|
Male
|
GTEX-13VXU-1826 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; totally autolyzed mucosa; no muscularis propria
|
Unacceptable
|
|
GTEX-13VXU
|
51-60
|
Male
|
GTEX-13VXU-2626 |
Prostate
|
PAXgene |
3
|
2 pieces; glands completely autolyzed
|
Acceptable
|
|
GTEX-13W46
|
51-60
|
Male
|
GTEX-13W46-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; full thickness sections, moderate to severe autolysis
|
Acceptable
|
|
GTEX-13X6J
|
51-60
|
Male
|
GTEX-13X6J-2226 |
Pancreas
|
PAXgene |
3
|
2 pieces; severely autolyzed
|
Unacceptable
|
|
GTEX-13X6J
|
51-60
|
Male
|
GTEX-13X6J-2626 |
Colon, transverse
|
PAXgene |
3
|
4 pieces; full thickness sections with severely autolyzed mucosa, discontinuous in one piece
|
Acceptable
|
|
GTEX-13X6J
|
51-60
|
Male
|
GTEX-13X6J-2726 |
Ileum
|
PAXgene |
3
|
4 pieces; good lymphoid component, but very autolyzed, muscularis (not target) also present
|
Unacceptable
|
|
GTEX-13X6K
|
61-70
|
Female
|
GTEX-13X6K-2326 |
Stomach
|
PAXgene |
3
|
6 pieces, mucosa up to ~40 % thickness, moderate-advanced autolysis
|
Acceptable
|
|
GTEX-13X6K
|
61-70
|
Female
|
GTEX-13X6K-2526 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa completely autolyzed/sloughed
|
Acceptable
|
|
GTEX-13X6K
|
61-70
|
Female
|
GTEX-13X6K-2626 |
Ileum
|
PAXgene |
3
|
4 piecesm glandular mucosa sloughed; residual lymphoid elements ~30% of tissue, delineated
|
Acceptable
|
|
GTEX-13YAN
|
61-70
|
Male
|
GTEX-13YAN-1726 |
Spleen
|
PAXgene |
3
|
2 pieces, marked congestion
|
Acceptable
|
|
GTEX-13YAN
|
61-70
|
Male
|
GTEX-13YAN-2226 |
Prostate
|
PAXgene |
3
|
2 pieces, glandular elements with advanced autolysis
|
Acceptable
|
|
GTEX-13YAN
|
61-70
|
Male
|
GTEX-13YAN-2426 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces, markedd glomerulosclerosis; tubules badly autolyzed
|
Acceptable
|
|
GTEX-13YAN
|
61-70
|
Male
|
GTEX-13YAN-2526 |
Stomach
|
PAXgene |
3
|
6 pieces mucosa up to ~20% thickness, but with advanced autolysis
|
Acceptable
|
|
GTEX-13YAN
|
61-70
|
Male
|
GTEX-13YAN-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa totally autolyzed/sloughed
|
Acceptable
|
|
GTEX-13YAN
|
61-70
|
Male
|
GTEX-13YAN-2726 |
Ileum
|
PAXgene |
3
|
4 pieces, mucosa autolyzed; residual lymphoid aggregates delineated; ~15% total tissue
|
Acceptable
|
|
GTEX-1445S
|
61-70
|
Male
|
GTEX-1445S-1526 |
Spleen
|
PAXgene |
3
|
2 pieces, moderate congestion, advance autolysis
|
Acceptable
|
|
GTEX-1445S
|
61-70
|
Male
|
GTEX-1445S-2026 |
Stomach
|
PAXgene |
3
|
6 pieces, mucosa is ~0.7mm, ~25% thickness, advanced autolysis
|
Acceptable
|
|