GTEX-13112
|
51-60
|
Male
|
GTEX-13112-2126 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; 2 pieces are mostly medulla [annotated]
|
Acceptable
|
|
GTEX-13113
|
61-70
|
Female
|
GTEX-13113-0826 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, mucosa score ranges from 1 to mainly '2' as noted; ~15% total thickness, ~0.5mm
|
Acceptable
|
|
GTEX-1313W
|
51-60
|
Female
|
GTEX-1313W-0726 |
Thyroid gland
|
PAXgene |
2
|
2 pieces
|
Acceptable
|
|
GTEX-1313W
|
51-60
|
Female
|
GTEX-1313W-1726 |
Liver
|
PAXgene |
2
|
2 pieces
|
Acceptable
|
|
GTEX-1313W
|
51-60
|
Female
|
GTEX-1313W-1826 |
Spleen
|
PAXgene |
2
|
2 pieces
|
Acceptable
|
|
GTEX-1313W
|
51-60
|
Female
|
GTEX-1313W-1926 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces, 3 pieces include gastric mucosa
|
Unacceptable
|
|
GTEX-1313W
|
51-60
|
Female
|
GTEX-1313W-2126 |
Stomach
|
PAXgene |
2
|
6 pieces, moderately autolyzed mucosa and musculairs
|
Acceptable
|
|
GTEX-1313W
|
51-60
|
Female
|
GTEX-1313W-2426 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, predominantly well trimmed with scant residual mucosa (marked)
|
Acceptable
|
|
GTEX-1313W
|
51-60
|
Female
|
GTEX-1313W-2526 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, glomeruli in all sections, few sclerotic
|
Acceptable
|
|
GTEX-1313W
|
51-60
|
Female
|
GTEX-1313W-2626 |
Adrenal glands
|
PAXgene |
2
|
2 pieces, each is ~50% fat
|
Acceptable
|
|
GTEX-1314G
|
21-40
|
Male
|
GTEX-1314G-0726 |
Pancreas
|
PAXgene |
2
|
2 pieces; moderate nodular fibrosis and atrophy
|
Acceptable
|
|
GTEX-1314G
|
21-40
|
Male
|
GTEX-1314G-0826 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces; chronic esophagitis, squamous epithelium largely sloughed
|
Acceptable
|
|
GTEX-1314G
|
21-40
|
Male
|
GTEX-1314G-1126 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; rare sclerosed glomeruli
|
Acceptable
|
|
GTEX-131XG
|
51-60
|
Female
|
GTEX-131XG-1726 |
Ileum
|
PAXgene |
2
|
6 pieces, mucosa variably preserved, rare lymphoid aggregates, rep encircled
|
Acceptable
|
|
GTEX-131XH
|
51-60
|
Male
|
GTEX-131XH-0926 |
Spleen
|
PAXgene |
2
|
2 pieces, moderate congestion
|
Acceptable
|
|
GTEX-131XH
|
51-60
|
Male
|
GTEX-131XH-1926 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, >50% mucosa, incorrect target for sigmoid colon for GTEx purposes
|
Unacceptable
|
|
GTEX-131XH
|
51-60
|
Male
|
GTEX-131XH-2126 |
Testis
|
PAXgene |
2
|
2 pieces, spermatogenesis is present
|
Acceptable
|
|
GTEX-131XW
|
51-60
|
Female
|
GTEX-131XW-0826 |
Thyroid gland
|
PAXgene |
2
|
2 pieces, some fibrosis and nodularity with degenerative change and focal chronic inflammation
|
Acceptable
|
|
GTEX-131XW
|
51-60
|
Female
|
GTEX-131XW-1526 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, cortex and medulla
|
Unacceptable
|
|
GTEX-131XW
|
51-60
|
Female
|
GTEX-131XW-1626 |
Adrenal glands
|
PAXgene |
2
|
2 pieces
|
Acceptable
|
|
GTEX-131XW
|
51-60
|
Female
|
GTEX-131XW-2026 |
Stomach
|
PAXgene |
2
|
6 pieces, moderately autolyzed mucosa and muscularis
|
Acceptable
|
|
GTEX-131XW
|
51-60
|
Female
|
GTEX-131XW-2626 |
Ileum
|
PAXgene |
2
|
6 pieces, good lymphoid component, but includes abundant muscularis
|
Unacceptable
|
|
GTEX-131YS
|
61-70
|
Female
|
GTEX-131YS-1326 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces; 3 of 6 contain gastric mucosa (not target) in addition to muscularis (target)
|
Unacceptable
|
|
GTEX-131YS
|
61-70
|
Female
|
GTEX-131YS-1826 |
Spleen
|
PAXgene |
2
|
2 pieces; congestion, one with large vessle and internal fat up to 30%
|
Acceptable
|
|
GTEX-131YS
|
61-70
|
Female
|
GTEX-131YS-1926 |
Pancreas
|
PAXgene |
2
|
2 pieces; intraacinar and perilobular fibrosis; Islets noted
|
Acceptable
|
|