GTEX-144GO
|
61-70
|
Male
|
GTEX-144GO-2226 |
Stomach
|
PAXgene |
3
|
6 pieces; predominantly full thickness sections, severe autolysis
|
Unacceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-144GO
|
61-70
|
Male
|
GTEX-144GO-2326 |
Ileum
|
PAXgene |
3
|
4 pieces; good lymphoid component, but severe autolysis, small portion of muscularis (not target)
|
Unacceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-144GO
|
61-70
|
Male
|
GTEX-144GO-2426 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; mostly muscularis, but several include significant component of residual fat/submucosa/autolyzed mucosa
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-144GO
|
61-70
|
Male
|
GTEX-144GO-2526 |
Testis
|
PAXgene |
1
|
2 pieces; atrophy with tubular hyalinization, portion of appendix testis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-144GO
|
61-70
|
Male
|
GTEX-144GO-2626 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces; well trimmed
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-144GO
|
61-70
|
Male
|
GTEX-144GO-2726 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces; few dilated glands, squamous epithelium incomplete, focal ulceration
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-144GO
|
61-70
|
Male
|
GTEX-144GO-2826 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well trimmed
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-144GO
|
61-70
|
Male
|
GTEX-144GO-2926 |
Brain - cerebellum
|
PAXgene |
2
|
4 pieces; some suggestion of hypoxic change, portion of meninges
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-144GO
|
61-70
|
Male
|
GTEX-144GO-3026 |
Brain - cortex
|
PAXgene |
2
|
4 pieces
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-144GO
|
61-70
|
Male
|
GTEX-144GO-3126 |
Pituitary gland
|
PAXgene |
1
|
1 piece; fragment of bone and bone marrow, dura and adenohypophysis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-145LT
|
41-50
|
Male
|
GTEX-145LT-0126 |
Adrenal glands
|
PAXgene |
1
|
2 pieces, all cortex, good specimens
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-145LT
|
41-50
|
Male
|
GTEX-145LT-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-145LT
|
41-50
|
Male
|
GTEX-145LT-0326 |
Lung
|
PAXgene |
1
|
2 pieces, mild congestion, atalectasis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-145LT
|
41-50
|
Male
|
GTEX-145LT-0426 |
Testis
|
PAXgene |
1
|
2 pieces, ~50% viable seminiferous tubules; rest either infarcted/epididymis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-145LT
|
41-50
|
Male
|
GTEX-145LT-0526 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, minimal dermal fat; squamous epithelium is ~40 microns
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-145LT
|
41-50
|
Male
|
GTEX-145LT-0626 |
Prostate
|
PAXgene |
1
|
2 pieces, focal PIN, not obvious tumor
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-145LT
|
41-50
|
Male
|
GTEX-145LT-0726 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, gynecomastoid stromal hyperplasia; rep ductal elements delineated
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-145LT
|
41-50
|
Male
|
GTEX-145LT-0826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, target muscularis; trace (<1mm) 'contaminant' mucosa present; delineated
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-145LT
|
41-50
|
Male
|
GTEX-145LT-0926 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, remarkably well preserved, mucosa ~0.3mm, 10% thickness, valuable specimen
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-145LT
|
41-50
|
Male
|
GTEX-145LT-1026 |
Ileum
|
PAXgene |
1
|
6 pieces, lymphoid aggregates (rep delineated)are ~30% of specimen, well preserved
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-145LT
|
41-50
|
Male
|
GTEX-145LT-1126 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, Squamous mucosa is ~0.6mm, ~15-20% thickness; submucosal lymphoid aggregates are prominent, rep delineated
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-145LT
|
41-50
|
Male
|
GTEX-145LT-1226 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, target muscularis, good specimens
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-145LT
|
41-50
|
Male
|
GTEX-145LT-1326 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, target muscularis, good specimens
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-145LT
|
41-50
|
Male
|
GTEX-145LT-1426 |
Stomach
|
PAXgene |
1
|
6 pieces, mucosa well - preserved, up to ~0.9mm, ~3040% thickness
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-145LT
|
41-50
|
Male
|
GTEX-145LT-1526 |
Omentum
|
PAXgene |
1
|
2 pieces, minimal fascia
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |