GTEX-1F52S
|
61-70
|
Female
|
GTEX-1F52S-2826 |
Stomach
|
PAXgene |
2
|
6 pieces; totally autolyzed mucosa; intact muscularis
|
Acceptable
|
|
GTEX-1F52S
|
61-70
|
Female
|
GTEX-1F52S-2926 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; 20% dermal fat
|
Acceptable
|
|
GTEX-1F52S
|
61-70
|
Female
|
GTEX-1F52S-3026 |
Brain - cerebellum
|
PAXgene |
2
|
4 pieces; foci of adherent meninges; autolysis varies from 1 to 2
|
Acceptable
|
|
GTEX-1F52S
|
61-70
|
Female
|
GTEX-1F52S-3126 |
Brain - cortex
|
PAXgene |
1
|
4 pieces
|
Acceptable
|
|
GTEX-1F52S
|
61-70
|
Female
|
GTEX-1F52S-3226 |
Pituitary gland
|
PAXgene |
2
|
1 piece; adeno:neurohypophysis= 60:40%
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-0126 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~40% fascia/vacular elements
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-0226 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, single nubbin adherent fat up to ~0.8mm, delineated
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-0326 |
Skin, leg
|
PAXgene |
0
|
6 pieces, no dermal fat; squamous epithelium is ~ 40-50 microns
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-0426 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~10% interstitial fat; rep foci delineated
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-0526 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, no significant adherent fat or atherosis; focal Monckeberg medial sclerosis, rep. delineated
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-0626 |
Liver
|
PAXgene |
1
|
2 pieces established cirrhosis with diffuse marked macrovesicular steatosis
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-0726 |
Pancreas
|
PAXgene |
1
|
2 pieces, focally approaching score 2 for autolysis; Islets well-preserved, rep delineated. Focal adherent fat, ~2mm
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-0826 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-0926 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, minimal dermal fat; squamous epithelium is ~50-60 microns
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-1026 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, fibrous mastopathy; ductal/lobular elements atrophic, rep. delineated
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-1126 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-1226 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-1326 |
Omentum
|
PAXgene |
1
|
2 pieces, ~5% vascular elements; rep delineated
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-1426 |
Stomach
|
PAXgene |
1
|
6 pieces, mucosa up to ~1.2mm, ~40-60% thickness. Basal microglandular dilation encircled, destruction of chief cells predominately, unusual pattern
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-1526 |
Uterus
|
PAXgene |
1
|
2 pieces, myometrium. Trace basalis endometrial stroma, delineated, no glandular elements
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-1626 |
Ovary
|
PAXgene |
1
|
2 pieces, post menopausal atrophy/involutional changes
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-1726 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa is ~0.17mm, 10-15% thickness
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-1826 |
Vagina
|
PAXgene |
1
|
6 pieces, squamous epithelium is ~0.22mm, ~5-10% thickness
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-1926 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis; adherent nubbins of fat, 1-2mm, rep delineated
|
Acceptable
|
|
GTEX-1F5PL
|
41-50
|
Female
|
GTEX-1F5PL-2026 |
Ileum
|
PAXgene |
1
|
6 pieces, colonic mucosa, unknown site, not GTEx target tissue
|
Unacceptable
|
|