GTEX-16MT9
|
61-70
|
Female
|
GTEX-16MT9-1726 |
Spleen
|
PAXgene |
2
|
2 pieces; severe congestion
|
Acceptable
|
|
GTEX-16MT9
|
61-70
|
Female
|
GTEX-16MT9-1826 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; predominantly adrenal cortex with ~10% fat in one piece
|
Acceptable
|
|
GTEX-16MT9
|
61-70
|
Female
|
GTEX-16MT9-1926 |
Stomach
|
PAXgene |
3
|
6 pieces; full thickness sections with moderately to severely autolyzed mucosa
|
Acceptable
|
|
GTEX-16MT9
|
61-70
|
Female
|
GTEX-16MT9-2026 |
Pancreas
|
PAXgene |
2
|
2 pieces; 80% and 40% internal/external fat, ? focal PanIN
|
Acceptable
|
|
GTEX-16MT9
|
61-70
|
Female
|
GTEX-16MT9-2126 |
Liver
|
PAXgene |
2
|
2 pieces; severe congestion; mild steatosis
|
Acceptable
|
|
GTEX-16MT9
|
61-70
|
Female
|
GTEX-16MT9-2226 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; tubules very autolyzed, cannot distinguish from acute tubular necrosis, scattered sclerotic glomeruli (rep outlined), arterio/arteroiolonephrosclerosis
|
Acceptable
|
|
GTEX-16MT9
|
61-70
|
Female
|
GTEX-16MT9-2326 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis with attached fat up to 1.2mm
|
Acceptable
|
|
GTEX-16MT9
|
61-70
|
Female
|
GTEX-16MT9-2426 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; moderately to severely autolyzed mucosa and better preserved muscularis; congestion
|
Acceptable
|
|
GTEX-16MT9
|
61-70
|
Female
|
GTEX-16MT9-2526 |
Ileum
|
PAXgene |
3
|
6 pieces; autolyzed mucosa with target lymphoid tissue in 4 pieces (arrowed)
|
Acceptable
|
|
GTEX-16MT9
|
61-70
|
Female
|
GTEX-16MT9-2626 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; predominantly mature adipose tissue with fibrous stroma with scattered ducts and scant atrophic lobules
|
Acceptable
|
|
GTEX-16MT9
|
61-70
|
Female
|
GTEX-16MT9-2726 |
Vagina
|
PAXgene |
1
|
6 pieces; congested fibromuscular stroma and skeletal muscle fragments (arrowed) only in this section
|
Acceptable
|
|
GTEX-16XZY
|
61-70
|
Male
|
GTEX-16XZY-0126 |
Spleen
|
PAXgene |
0
|
2 pieces, fragmented; congestion, portion of capsule in 1 piece
|
Acceptable
|
|
GTEX-16XZY
|
61-70
|
Male
|
GTEX-16XZY-0226 |
Aorta
|
PAXgene |
0
|
6 pieces; sparse rim of adventitia; possible early plaque formation
|
Acceptable
|
|
GTEX-16XZY
|
61-70
|
Male
|
GTEX-16XZY-0326 |
Coronary artery
|
PAXgene |
0
|
2 pieces; vein with adherent fat, connective tissue and myocardium
|
Unacceptable
|
|
GTEX-16XZY
|
61-70
|
Male
|
GTEX-16XZY-0426 |
Heart
|
PAXgene |
1
|
2 pieces; intramuscular vessels surrounded by ~1mm rim of adipose tissue; accentuation of interstitial connective tissue
|
Acceptable
|
|
GTEX-16XZY
|
61-70
|
Male
|
GTEX-16XZY-0526 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; one consists of myocardium and ~30-40% fibrous tissue with focal fat; other consists of myocardium and intramuscular vessles (arrows)
|
Acceptable
|
|
GTEX-16XZY
|
61-70
|
Male
|
GTEX-16XZY-0626 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces; one consists of 60% mature adipose tissue/40% fibrous tissue, other 40% mature adipose tissue/60% ductal structures embedded in fibrous stroma
|
Acceptable
|
|
GTEX-16XZY
|
61-70
|
Male
|
GTEX-16XZY-0726 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; one with ~50% of fibrovascular and adipose tissue attached; other with central empty spaces (arrow, ? poor fixation)
|
Acceptable
|
|
GTEX-16XZY
|
61-70
|
Male
|
GTEX-16XZY-0826 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; not pancreas, adrenal gland,
one is ~50% fibroadipose tissue and capsule (outlined) and mildly to moderately autolyzed adrenal gland (predominantly cortex); second is ~20% fat and mildly to moderately autolyzed adrenal
|
Acceptable
|
|
GTEX-16XZY
|
61-70
|
Male
|
GTEX-16XZY-0926 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; superficial epithelial desquamation; squamous epithelium ~0.3mm thick, esophagitis, small portion of muscularis
|
Acceptable
|
|
GTEX-16XZY
|
61-70
|
Male
|
GTEX-16XZY-1026 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces; advanced arterio and arteriolonephrosclerosis with hyalinized glomeruli and chronic nephritis; end stage renal disease, diabetic glomerulosclerosis
|
Acceptable
|
|
GTEX-16XZY
|
61-70
|
Male
|
GTEX-16XZY-1126 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; confirmed target muscularis propria, however, one piece contains only small fragment (outlined); fibrofatty tissue (all pieces), up to ~2mm, focal collections of inflammatory cells
|
Acceptable
|
|
GTEX-16XZY
|
61-70
|
Male
|
GTEX-16XZY-1226 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; stomach, not GE junction, predominantly mucosa with scant attached muscularis, chronic active gastritis
|
Unacceptable
|
|
GTEX-16XZY
|
61-70
|
Male
|
GTEX-16XZY-1326 |
Stomach
|
PAXgene |
1
|
6 pieces; MUSCULARIS, NOT STOMACH, up to ~1.3mm attached fibrofatty tissue
|
Unacceptable
|
|
GTEX-16XZY
|
61-70
|
Male
|
GTEX-16XZY-1426 |
Omentum
|
PAXgene |
1
|
2 pieces; mature adipose tissue with fibrovascular septa
|
Acceptable
|
|