GTEX-Y8E4
|
41-50
|
Male
|
GTEX-Y8E4-1826 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, up to 9x5mm; well dissected.
|
Acceptable
|
|
GTEX-Y8E4
|
41-50
|
Male
|
GTEX-Y8E4-1926 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, up to 10x5mm; one with small portion of squamous mucosa and mild chronic inflammation
|
Acceptable
|
|
GTEX-Y8E4
|
41-50
|
Male
|
GTEX-Y8E4-2026 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces, up to 8x3.5mm; not well trimmed, 10-20% adipose tissue in aggregate.
|
Acceptable
|
|
GTEX-Y8E4
|
41-50
|
Male
|
GTEX-Y8E4-2126 |
Prostate
|
PAXgene |
1
|
2 pieces, 10x8 & 8.5x8mm; good glandular component.
|
Acceptable
|
|
GTEX-Y8E4
|
41-50
|
Male
|
GTEX-Y8E4-2226 |
Testis
|
PAXgene |
1
|
2 pieces, 14x7 & 8x8mm; spermatogenesis.
|
Acceptable
|
|
GTEX-Y8E4
|
41-50
|
Male
|
GTEX-Y8E4-2326 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 8.4x3mm. All specimens have mucosa as well as the targeted muscularis propria. Mucosa=2, muscle=1.
|
Acceptable
|
|
GTEX-Y8E4
|
41-50
|
Male
|
GTEX-Y8E4-2426 |
Colon, transverse
|
PAXgene |
2
|
1 piece, 9x3mm; well trimmed
|
Acceptable
|
|
GTEX-Y8E4
|
41-50
|
Male
|
GTEX-Y8E4-2526 |
Ileum
|
PAXgene |
2
|
4 pieces, up to 8x5mm; several small foci of lymphoid tissue (annotated) in severely autolyzed and fragmented mucosa.
|
Acceptable
|
|
GTEX-YB5E
|
41-50
|
Male
|
GTEX-YB5E-0126 |
Aorta
|
PAXgene |
1
|
6 pieces, 3 with trace adherent serosa
|
Acceptable
|
|
GTEX-YB5E
|
41-50
|
Male
|
GTEX-YB5E-0226 |
Adrenal glands
|
PAXgene |
2
|
2 pieces, 15x8 & 15x8mm; all cortex, moderately autolyzed
|
Acceptable
|
|
GTEX-YB5E
|
41-50
|
Male
|
GTEX-YB5E-0326 |
Liver
|
PAXgene |
1
|
2 pieces, 12x10 & 11x11mm; marked central and mid-zonal coagulative necrosis necrosis, shock vs toxic damage by drugs
|
Acceptable
|
|
GTEX-YB5E
|
41-50
|
Male
|
GTEX-YB5E-0426 |
Spleen
|
PAXgene |
1
|
2 pieces, 17x9 & 14x9mm; moderate congestion
|
Acceptable
|
|
GTEX-YB5E
|
41-50
|
Male
|
GTEX-YB5E-0526 |
Pancreas
|
PAXgene |
1
|
2 pieces, 14.5x7 & 21x10mm; well preserved, islets well seen, rep. ones delineated
|
Acceptable
|
|
GTEX-YB5E
|
41-50
|
Male
|
GTEX-YB5E-0626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, 12x7.5 & 12.5x12mm; no significant pathology
|
Acceptable
|
|
GTEX-YB5E
|
41-50
|
Male
|
GTEX-YB5E-0726 |
Lung
|
PAXgene |
1
|
2 pieces, 11x8 & 11x10mm; marked acute and focally necrotizing aspiration-pneumonia and bronchitis, rep . areas delineated. Degenerating vegetable matter noted in inflammatory debris
|
Acceptable
|
|
GTEX-YB5E
|
41-50
|
Male
|
GTEX-YB5E-0826 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, up to 9x4.5mm; all muccualris, good specimens
|
Acceptable
|
|
GTEX-YB5E
|
41-50
|
Male
|
GTEX-YB5E-0926 |
Esophagus - mucosa
|
PAXgene |
1
|
1 piece, 9.5x3.5mm; squamous mucosa is ~10-15% thickness
|
Acceptable
|
|
GTEX-YB5E
|
41-50
|
Male
|
GTEX-YB5E-1026 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, up to 10.5x5mm; all muscularis, good specimens
|
Acceptable
|
|
GTEX-YB5E
|
41-50
|
Male
|
GTEX-YB5E-1126 |
Stomach
|
PAXgene |
1
|
1 piece, 12x2mm; mucosa is well preserved, ~90% thickness, gastric gland dilation
|
Acceptable
|
|
GTEX-YB5E
|
41-50
|
Male
|
GTEX-YB5E-1226 |
Omentum
|
PAXgene |
1
|
2 pieces, 15x10 & 12x9mm; prominent muscular arteries/ lylmph node noted, all delineated
|
Acceptable
|
|
GTEX-YB5E
|
41-50
|
Male
|
GTEX-YB5E-1326 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces, up to 12x4.5mm; squamous epithelium up to ~1.5% thickness, minimal fat
|
Acceptable
|
|
GTEX-YB5E
|
41-50
|
Male
|
GTEX-YB5E-1426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 8x5mm; all muscularis, a few aliquots have ~1mm nubbins adherent fat, delineated
|
Acceptable
|
|
GTEX-YB5E
|
41-50
|
Male
|
GTEX-YB5E-1526 |
Ileum
|
PAXgene |
1
|
6 pieces, up to 10x2mm; mainly mucosa, ~5% lymphoid follicles
|
Acceptable
|
|
GTEX-YB5E
|
41-50
|
Male
|
GTEX-YB5E-1626 |
Colon, transverse
|
PAXgene |
1
|
1 piece, 13x875.6um; 40-60% mucosa, reasonably well-preserved
|
Acceptable
|
|
GTEX-YB5E
|
41-50
|
Male
|
GTEX-YB5E-1726 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 14x12.5x13x12mm; fibrous tisssue is ~40% intermingled (delineated), no TDLUs (ie, ductal elements)
|
Acceptable
|
|