GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-2326 |
Ileum
|
PAXgene |
2
|
4 pieces, up to 5x3mm; autolyzed mucosa with small lymphoid groups (marked on image); no muscle (good); lots of submucosal adipose (can't be helped)
|
Acceptable
|
|
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-2426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, up to 8x2mm; autolyzed mucosa (3); muscle moderately autolyzed (2)
|
Acceptable
|
|
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-2626 |
Prostate
|
PAXgene |
2
|
6 pieces, up to 8x2mm; variable amounts of stroma and hyperplastic glands
|
Acceptable
|
|
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-2726 |
Testis
|
PAXgene |
2
|
2 pieces, 7x5 & 7x5mm; reduced spermatogenesis
|
Acceptable
|
|
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-2826 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 8x4mm; all have full thickness (muscle target, mucosa not wanted)
|
Acceptable
|
|
GTEX-WVLH
|
51-60
|
Male
|
GTEX-WVLH-0826 |
Lung
|
PAXgene |
2
|
2 pieces ~7x6mm, diffuse patchy congestion, moderately poorly preserved; degenerating foci of bronchial mucosa encircled
|
Acceptable
|
|
GTEX-WVLH
|
51-60
|
Male
|
GTEX-WVLH-1226 |
Aorta
|
PAXgene |
2
|
6 pieces ~8x1.5mm. Up to ~0.25mm layer atherosis present, representative areas delineated
|
Acceptable
|
|
GTEX-WVLH
|
51-60
|
Male
|
GTEX-WVLH-1926 |
Adrenal glands
|
PAXgene |
2
|
2 pieces ~13 x 3mm, ~30% adherent fat, delineated
|
Acceptable
|
|
GTEX-WVLH
|
51-60
|
Male
|
GTEX-WVLH-2126 |
Liver
|
PAXgene |
2
|
2 pieces ~ ~8x8mm. Chronic passive congestion, mild-moderate, minimal (<10%) macrovesicular steatosis
|
Acceptable
|
|
GTEX-WVLH
|
51-60
|
Male
|
GTEX-WVLH-2226 |
Stomach
|
PAXgene |
2
|
6 pieces ~8x3mm, ~40-50% mucosa, but badly autolyzed
|
Acceptable
|
|
GTEX-WVLH
|
51-60
|
Male
|
GTEX-WVLH-2626 |
Testis
|
PAXgene |
2
|
2 pieces ~8x6mm. Spermatogenesis is presnet but reduced
|
Acceptable
|
|
GTEX-WWTW
|
51-60
|
Male
|
GTEX-WWTW-0226 |
Adipose tissue
|
PAXgene |
2
|
2 pieces~7x7mm
|
Acceptable
|
|
GTEX-WWTW
|
51-60
|
Male
|
GTEX-WWTW-0526 |
Artery - tibial
|
PAXgene |
2
|
2 pieces unusually badly autolyzed
|
Acceptable
|
|
GTEX-WWTW
|
51-60
|
Male
|
GTEX-WWTW-0626 |
Muscle, skeletal
|
PAXgene |
2
|
2 pieces, 8x6mm unusually badly autolyzed
|
Acceptable
|
|
GTEX-WWTW
|
51-60
|
Male
|
GTEX-WWTW-1026 |
Aorta
|
PAXgene |
2
|
6 pieces ~7x1.5mm
|
Acceptable
|
|
GTEX-WWTW
|
51-60
|
Male
|
GTEX-WWTW-1126 |
Heart
|
PAXgene |
2
|
2 pieces, ~8x6mm unusually badly autolyzed
|
Acceptable
|
|
GTEX-WWTW
|
51-60
|
Male
|
GTEX-WWTW-1226 |
Atrial appendage
|
PAXgene |
2
|
1 piece, ~8x6mm unususually badly autolyzed
|
Acceptable
|
|
GTEX-WWTW
|
51-60
|
Male
|
GTEX-WWTW-1326 |
Omentum
|
PAXgene |
2
|
2 pieces ~8x7mm
|
Acceptable
|
|
GTEX-WWTW
|
51-60
|
Male
|
GTEX-WWTW-1726 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces all muscle ~6x2.5mm
|
Acceptable
|
|
GTEX-WWTW
|
51-60
|
Male
|
GTEX-WWTW-1826 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces~5x2mm, only minimal sloughing badly autolyzed squamous mucosa. Can be used if re-labeled as muscularis
|
Acceptable
|
|
GTEX-WWTW
|
51-60
|
Male
|
GTEX-WWTW-1926 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces ~~7x2mm
|
Acceptable
|
|
GTEX-WWTW
|
51-60
|
Male
|
GTEX-WWTW-2226 |
Thyroid gland
|
PAXgene |
2
|
2 pieces, no thyroid tissue, fibroadipose tissue of unknown provenance.
|
Unacceptable
|
|
GTEX-WWYW
|
51-60
|
Female
|
GTEX-WWYW-0826 |
Thyroid gland
|
PAXgene |
2
|
2pieces ~ 7x7mm, unusually poorly preserved
|
Acceptable
|
|
GTEX-WWYW
|
51-60
|
Female
|
GTEX-WWYW-1026 |
Liver
|
PAXgene |
2
|
2 pieces ~7x7mm, moderately-badly autolyzed, prominent fibrous areas delineated
|
Acceptable
|
|
GTEX-WWYW
|
51-60
|
Female
|
GTEX-WWYW-1126 |
Atrial appendage
|
PAXgene |
2
|
2 pieces `7x6mm
|
Acceptable
|
|