GTEX-WQUQ
|
61-70
|
Male
|
GTEX-WQUQ-2026 |
Spleen
|
PAXgene |
2
|
2 pieces ~8x5mm
|
Acceptable
|
 |
GTEX-WQUQ
|
61-70
|
Male
|
GTEX-WQUQ-2326 |
Stomach
|
PAXgene |
2
|
6 pieces ~8x3mm 10-15% mucosa, moderate-severely autolyzed, diffuse chronic gastritis, pattern suggests H pylori
|
Acceptable
|
 |
GTEX-WQUQ
|
61-70
|
Male
|
GTEX-WQUQ-2526 |
Colon, transverse
|
PAXgene |
2
|
6 pieces ~7x4mm, mucosa moderately autoyzed, 10-20% of thickness
|
Acceptable
|
 |
GTEX-WQUQ
|
61-70
|
Male
|
GTEX-WQUQ-2726 |
Prostate
|
PAXgene |
2
|
2 pieces ~9x8mm. Moderate-severe glandular autolysis, diffuse acute and chronic prostatitis, areas delineated
|
Acceptable
|
 |
GTEX-WRHU
|
51-60
|
Female
|
GTEX-WRHU-0426 |
Adrenal glands
|
PAXgene |
2
|
2 pieces ~14x2mm, all cortex, each aliquot ~40-50% fat, delineated
|
Acceptable
|
 |
GTEX-WRHU
|
51-60
|
Female
|
GTEX-WRHU-0526 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces ~7x3mm
|
Acceptable
|
 |
GTEX-WRHU
|
51-60
|
Female
|
GTEX-WRHU-1826 |
Pancreas
|
PAXgene |
2
|
2 pieces ~9x7mm, moderate autolysis/saponification. Islets reasonably well-visualized; representative ones encircled. Minimal adherent fat
|
Acceptable
|
 |
GTEX-WRHU
|
51-60
|
Female
|
GTEX-WRHU-1926 |
Uterus
|
PAXgene |
2
|
2 pieces ~9x8mm all muscularis, no viable endometrium noted
|
Acceptable
|
 |
GTEX-WRHU
|
51-60
|
Female
|
GTEX-WRHU-2226 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces ~8x2.5mm; muscularis propria is ~90% of specimens, representative areas delineated
|
Acceptable
|
 |
GTEX-WRHU
|
51-60
|
Female
|
GTEX-WRHU-2326 |
Colon, transverse
|
PAXgene |
2
|
6 pieces ~8x2.5mm, mucosa moderately-badly autolyzed, ~10-20% thickness
|
Acceptable
|
 |
GTEX-WRHU
|
51-60
|
Female
|
GTEX-WRHU-2426 |
Stomach
|
PAXgene |
2
|
6 pieces ~9x2.5mm; mucosa moderately-badly autolyzed, ~40-50% thickness
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-0426 |
Artery - tibial
|
PAXgene |
2
|
2 pieces, 3x2 & 3x3mm; severe medial calcification; a small 0.7mm artery (and vein) nearby are free of lesions
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-0626 |
Muscle, skeletal
|
PAXgene |
2
|
2 pieces, 8x8 & 8.5x8mm; moderate atrophy; 20% internal adipose
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-0726 |
Thyroid gland
|
PAXgene |
2
|
2 pieces, 9x7.5 & 9x9mm; extensive fibrosis and lymphoid infiltrate typical of advanced Hashimoto thyoiditis (correlates with patient's hypothyroidism); oxyphilic metaplasia circled
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-0826 |
Lung
|
PAXgene |
2
|
2 pieces, 8x7 & 7x6mm; moderate vascular and interstitial fibrosis; heart failure cells
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-0926 |
Atrial appendage
|
PAXgene |
2
|
2 pieces, 9x6.5 & 8x7mm; no fat
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-1126 |
Coronary artery
|
PAXgene |
2
|
2 pieces, 3.5x3 & 3x2mm; severe atheromatous and calcific changes; no normal tissue
|
Unacceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-1326 |
Aorta
|
PAXgene |
2
|
6 pieces, up to 8x2mm; fine medial calcification, no plaques
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-1426 |
Liver
|
PAXgene |
2
|
2 pieces, 8x8 & 7x7mm; no lesions
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-1526 |
Spleen
|
PAXgene |
2
|
2 pieces, 10x9 & 8x8mm; moderate congestion
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-1626 |
Pancreas
|
PAXgene |
2
|
2 pieces, 10x9.5 & 8x7.5mm; 10% internal fat
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-1926 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces, up to 7x4mm; all muscle
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-2026 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces, up to 7x3mm; all muscle, no mucosa (good!)
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-2126 |
Adrenal glands
|
PAXgene |
2
|
2 pieces, 11x8 & 10x8mm; 1 is 90% adipose; other is 20% adipose
|
Acceptable
|
 |
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-2226 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, up to 7x2mm; severe glomerulosclerosis consistent with diabetes; no normal glomeruli; mixed cortex and medulla probably due to atrophy of cortex (described grossly)
|
Acceptable
|
 |