GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-1826 |
Uterus
|
PAXgene |
1
|
2 pieces, 11.5x5 & 8x6mm; cystic atrophy/weakly proliferative endometrium, up to ~2mm thick, delineated
|
Acceptable
|
|
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-1926 |
Vagina
|
PAXgene |
1
|
6 pieces, up to 5x4mm; mucosa is sloughed on all pieces
|
Acceptable
|
|
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-2026 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 12x11 & 13x12mm; atrophic TDLUs in one, delineated
|
Acceptable
|
|
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-2126 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, up to 7x3.5mm; squamous epithelium is ~2.5% thickness
|
Acceptable
|
|
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-2226 |
Minor salivary glands
|
PAXgene |
0
|
2 pieces, 4x4 & 4x4mm; all fat/skeletal muscle, no glandular elements.
|
Unacceptable
|
|
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-2326 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, 11x7.5 & 9.5x8mm;
|
Acceptable
|
|
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-2426 |
Skin, leg
|
PAXgene |
0
|
6 pieces, up to 9x3.5mm; squamous epithelium is ~3% ofthickness
|
Acceptable
|
|
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-2526 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, 10x7 & 11x10mm; less than 2% interstitial fat, good specimens
|
Acceptable
|
|
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-2626 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, 5x4.5 & 5x4mm; minute adherent nubbins of fat on both, ~0.5mm
|
Acceptable
|
|
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-2726 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, 6x4.5 & 7x5mm; 1mm adherent fibrous &/or peripher al nerve on both
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-0126 |
Adrenal glands
|
PAXgene |
1
|
2 pieces. 11.5x8 & 13x9mm; Smaller piece is 40% adipose.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-0226 |
Aorta
|
PAXgene |
0
|
6 pieces. up to 12.5x2.5mm; Adventitial extraneous stroma is up to 0.6 mm. No plaques.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-0326 |
Spleen
|
PAXgene |
1
|
2 pieces. 12x8 & 14x7mm; Not congested. Well defined lymphoid nodules.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-0426 |
Liver
|
PAXgene |
1
|
2 pieces. 13x9 & 13x10mm; 70% small droplet variant of macrovesicular steatosis.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-0526 |
Pancreas
|
PAXgene |
1
|
2 pieces. 18x9 & 13x10mm; 1 has 25% adipose.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-0626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces. 14x9 & 10x10mm
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-0726 |
Lung
|
PAXgene |
1
|
2 pieces. 11x8 & 9x7mm; Patchy alveolar hemorrhage.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-0826 |
Omentum
|
PAXgene |
1
|
2 pieces, 15x9 & 12x9mm: Central hollow defects in both pieces.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-0926 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces. up to 14x3mm; Well dissected, largely free of subcutaneous adipose.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-1026 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces. up to 9.5x4mm; Well dissected.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-1126 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces. up to 11.5x7mm; Up to 2mm of periesophageal extraneous fibrous stroma
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-1226 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces. up to 12x6mm; Most well dissected; some periesophageal stroma.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-1326 |
Stomach
|
PAXgene |
2
|
6 pieces. up to 8x3mm; Mucosa and submucosa only.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-1426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces. up to 9x4mm; Well dissected: muscle mainly; no mucosa.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-1526 |
Colon, transverse
|
PAXgene |
1
|
6 pieces. up to 12x3mm; Only 1 of 6 has muscularis. Transverse colon sample should have full thickness of wall.
|
Acceptable
|
|