GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-0826 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; accentuation of interstitial fibrosis with focal scarring (arrows)
|
Acceptable
|
|
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-0926 |
Omentum
|
PAXgene |
1
|
2 pieces; focal preserved mesothelial lining (arrow)
|
Acceptable
|
|
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-1026 |
Aorta
|
PAXgene |
1
|
6 pieces; ~1.0mm attached adventitia
|
Acceptable
|
|
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-1126 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; ~20% internal fat
|
Acceptable
|
|
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-1226 |
Coronary artery
|
PAXgene |
1
|
2 pieces; ~0.6mm of attached adventitia; partial mild plaque in 1
|
Acceptable
|
|
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-1326 |
Heart
|
PAXgene |
1
|
2 pieces; 2% internal fat (arrows)
|
Acceptable
|
|
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-1426 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; atrophic ducts & lobules in mainly fibrous stroma
|
Acceptable
|
|
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-1526 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; rare crystalline structures in small amount of submucosa, as described in the stomach
|
Unacceptable
|
|
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-1626 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; target muscularis
|
Acceptable
|
|
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-1726 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; ~0.25mm squamous epithelium; 2 pieces have some muscularis propria; crystals like those in stomach also in submucosa of esophagus
|
Unacceptable
|
|
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-1826 |
Stomach
|
PAXgene |
1
|
6 pieces; autolyzed mucosa grade 1 focally approaching grade 2; in submucosa scattered crystalline deposits without a reaction, resemble resins; little or no muscularis present
|
Unacceptable
|
|
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-1926 |
Pancreas
|
PAXgene |
1
|
2 pieces; ~10 % internal fat; accentuation of periductal fibrosis; Langerhans islets present (rep outlined)
|
Acceptable
|
|
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-2026 |
Uterus
|
PAXgene |
1
|
2 pieces; myometrium and foci of endometrial glands (outlined)
|
Acceptable
|
|
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-2126 |
Ovary
|
PAXgene |
1
|
2 pieces; ovarian cortex with follicles, corpora lutea and corpora albicantia
|
Acceptable
|
|
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-2226 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; 5 to 10% internal fat
|
Acceptable
|
|
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-2326 |
Vagina
|
PAXgene |
0
|
6 pieces;
|
Acceptable
|
|
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-2426 |
Ileum
|
PAXgene |
1
|
6 pieces; irregularly distributed target lymphoid aggregates (outlined) in half of the pieces; well dissectedmucosa & sumucosa
|
Acceptable
|
|
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-2526 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; grade 1 to 2 autolysed colonic mucosa; irregularly distributed lymphoid aggregates; 3 of 6 samples contain muscularis (outlined)
|
Acceptable
|
|
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis and up to 1.5mm submucosa; scattered insignificant fragmented colonic glands (outlined)
|
Acceptable
|
|
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-5001 |
Muscle, skeletal
|
Dry Ice |
|
1 piece; comparable to content in PAXgene sample
|
Acceptable
|
|
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-5004 |
Skin, leg
|
Dry Ice |
|
1 piece; comparable to content in PAXgene sample
|
Acceptable
|
|
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-5007 |
Lung
|
Dry Ice |
|
2 pieces; lung parenchyma without the fibrosis and other changes seen in the PAXgene samples
|
Acceptable
|
|
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-5010 |
Heart
|
Dry Ice |
|
1 piece; muscle with minimal fat
|
Acceptable
|
|
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-5013 |
Mammary tissue (breast)
|
Dry Ice |
|
1 piece; comparable to content in PAXgene sample
|
Acceptable
|
|
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-5016 |
Esophagus - muscularis
|
Dry Ice |
|
1 piece; skeletal muscle with minimal fat content; no sign of crystalline contaminants
|
Acceptable
|
|