GTEX-UTHO
|
61-70
|
Male
|
GTEX-UTHO-2926 |
Brain - cerebellum
|
PAXgene |
2
|
4 pieces, up to 6x4mm;
|
Acceptable
|
|
GTEX-UTHO
|
61-70
|
Male
|
GTEX-UTHO-3026 |
Brain - cortex
|
PAXgene |
2
|
4 pieces, up to 5x2.5mm;
|
Acceptable
|
|
GTEX-UTHO
|
61-70
|
Male
|
GTEX-UTHO-3126 |
Pituitary gland
|
PAXgene |
2
|
1 piece, 14x7mm; ~10% is posterior pituitary
|
Acceptable
|
|
GTEX-V1D1
|
51-60
|
Male
|
GTEX-V1D1-0226 |
Adrenal glands
|
PAXgene |
2
|
2 pieces ~8x5mm, all cortex, one has adherent 1.5mm nubbin of fat, otherwise clean but not well preserved
|
Acceptable
|
|
GTEX-V1D1
|
51-60
|
Male
|
GTEX-V1D1-1426 |
Ileum
|
PAXgene |
2
|
6 pieces, ~7x1.5mm. Lymphoid elements present to a depth of ~0.5mm or ~30%, muscularis still present
|
Acceptable
|
|
GTEX-V1D1
|
51-60
|
Male
|
GTEX-V1D1-1526 |
Colon, transverse
|
PAXgene |
2
|
6 pieces ~6x1.5mm ?sigmoid? mucosa is 20% of thickness, trace muscle
|
Acceptable
|
|
GTEX-V1D1
|
51-60
|
Male
|
GTEX-V1D1-1626 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces ~6x1mm mucosa is ~25% of thickness
|
Acceptable
|
|
GTEX-V1D1
|
51-60
|
Male
|
GTEX-V1D1-1926 |
Prostate
|
PAXgene |
2
|
2 pieces ~7x6mm. Glandular hyperplasia, mucosa poorly preserved
|
Acceptable
|
|
GTEX-V1D1
|
51-60
|
Male
|
GTEX-V1D1-2126 |
Testis
|
PAXgene |
2
|
2 pieces ~6x6mm. Spermatogenesis is present but poorly preserved
|
Acceptable
|
|
GTEX-VJWN
|
51-60
|
Female
|
GTEX-VJWN-0126 |
Skin, leg
|
PAXgene |
2
|
6 pieces, up to 6x3.5mm; subcutaneous adipose up to 0.7mm on 2 pieces
|
Acceptable
|
|
GTEX-VJWN
|
51-60
|
Female
|
GTEX-VJWN-0726 |
Mammary tissue (breast)
|
PAXgene |
2
|
2 pieces, 7x6 & 9x6.5mm; small number of lobules and ~90% adipose
|
Acceptable
|
|
GTEX-VJWN
|
51-60
|
Female
|
GTEX-VJWN-0826 |
Thyroid gland
|
PAXgene |
2
|
pieces, 8x5 & 7x6mm; ~20% adipose around one piece
|
Acceptable
|
|
GTEX-VJWN
|
51-60
|
Female
|
GTEX-VJWN-0926 |
Coronary artery
|
PAXgene |
2
|
2 pieces, 4x2 & 4x3.5mm; ~3mm arteries with extensive atherosclerosis and old and recent intramural hemorrhages narrowing lumen to about 10%; adipose encases arteries up to ~0.8mm
|
Acceptable
|
|
GTEX-VJWN
|
51-60
|
Female
|
GTEX-VJWN-1226 |
Aorta
|
PAXgene |
2
|
6 pieces, up to 9x1mm; focal calcification, no plaques; up to 1 mm adipose on adventitial side
|
Acceptable
|
|
GTEX-VJWN
|
51-60
|
Female
|
GTEX-VJWN-1326 |
Lung
|
PAXgene |
2
|
2 pieces, 7x7 & 8x6mm; markedly congested with focal hemorrhages; minimal air;
|
Acceptable
|
|
GTEX-VJWN
|
51-60
|
Female
|
GTEX-VJWN-1426 |
Spleen
|
PAXgene |
2
|
2 pieces, 8x7 & 9x5mm; moderately congested; capsule on one edge
|
Acceptable
|
|
GTEX-VJWN
|
51-60
|
Female
|
GTEX-VJWN-1526 |
Liver
|
PAXgene |
2
|
2 pieces, 8x8 & 9x7mm; moderately congested centrally associated with macrovesicular steatosis;
|
Acceptable
|
|
GTEX-VJWN
|
51-60
|
Female
|
GTEX-VJWN-1626 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces, up to 6x2mm; considerable surface sloughing
|
Acceptable
|
|
GTEX-VJWN
|
51-60
|
Female
|
GTEX-VJWN-1726 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces, up to 8x3mm; muscle show loss of cohesion
|
Acceptable
|
|
GTEX-VJWN
|
51-60
|
Female
|
GTEX-VJWN-1826 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces, up to 8x3mm; muscle show loss of cohesion
|
Acceptable
|
|
GTEX-VJWN
|
51-60
|
Female
|
GTEX-VJWN-2026 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, up to 7x3mm; scattered arteriolar and glomerular sclerosis (hypertensive?)
|
Acceptable
|
|
GTEX-VJWN
|
51-60
|
Female
|
GTEX-VJWN-2126 |
Pancreas
|
PAXgene |
2
|
2 pieces, 8x7 & 9x7.5mm; ~40 and 50% admixture with adipose and connective tissue; focal scarring of exocrine tissue in one piece
|
Acceptable
|
|
GTEX-VJWN
|
51-60
|
Female
|
GTEX-VJWN-2426 |
Ileum
|
PAXgene |
2
|
6 pieces, up to 7x1.5mm; mucosa totally autolyzed, but lymphoid tissue is present in submucosa of the two largest pieces; muscularis present
|
Acceptable
|
|
GTEX-VJWN
|
51-60
|
Female
|
GTEX-VJWN-2526 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, up to 6x2mm; mucosa totally autolyzed; muscle in better shape;
|
Acceptable
|
|
GTEX-VJWN
|
51-60
|
Female
|
GTEX-VJWN-2626 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 8x2mm; mucosa totally autolyzed; muscle in better shape;
|
Acceptable
|
|