GTEX-UPJH
|
51-60
|
Male
|
GTEX-UPJH-0926 |
Aorta
|
PAXgene |
2
|
6 pieces `8x1.5mm
|
Acceptable
|
|
GTEX-UPJH
|
51-60
|
Male
|
GTEX-UPJH-1926 |
Ileum
|
PAXgene |
2
|
6 pieces ~5x1.5mm. Includes muscle and lymphoid aggregates, epithelium autolyzed and sloughed. ~50% of specimen are lymphocytes
|
Acceptable
|
|
GTEX-UPJH
|
51-60
|
Male
|
GTEX-UPJH-2026 |
Colon, transverse
|
PAXgene |
2
|
6 pieces ~8 x 1.5mm Mucosa poorly preserved; where visible ~20% of thickness
|
Acceptable
|
|
GTEX-UPJH
|
51-60
|
Male
|
GTEX-UPJH-2126 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces ~7x 1.5mm Mucosa poorly preserved, ~30% of thickness (~300 microns)
|
Acceptable
|
|
GTEX-UPJH
|
51-60
|
Male
|
GTEX-UPJH-2226 |
Prostate
|
PAXgene |
2
|
2 pieces ~7x5mm. Glandular elements poorly preserved, glandular and stromal hyperplasia is evident
|
Acceptable
|
|
GTEX-UPK5
|
41-50
|
Male
|
GTEX-UPK5-0126 |
Coronary artery
|
PAXgene |
2
|
2 pieces, 4x3.5 & 5x4mm; 3mm arteries with up to 1.6 mm surrounding adipose
|
Acceptable
|
|
GTEX-UPK5
|
41-50
|
Male
|
GTEX-UPK5-1026 |
Testis
|
PAXgene |
2
|
2 pieces, 7x7 & 6x6mm; reduced spermatogenesis; patchy tubular fibrosis
|
Acceptable
|
|
GTEX-UPK5
|
41-50
|
Male
|
GTEX-UPK5-2126 |
Stomach
|
PAXgene |
2
|
6 pieces, up to 9x2mm; mucosa moderately autolyzed
|
Acceptable
|
|
GTEX-UPK5
|
41-50
|
Male
|
GTEX-UPK5-2226 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, up to 10x2mm; poor preservation of mucosa; muscularis better preserved
|
Acceptable
|
|
GTEX-UPK5
|
41-50
|
Male
|
GTEX-UPK5-2426 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 7x2mm; all have mucosa and muscularis; mucosa largely autolyzed
|
Acceptable
|
|
GTEX-UPK5
|
41-50
|
Male
|
GTEX-UPK5-2526 |
Prostate
|
PAXgene |
2
|
2 pieces, 9x8.5 & 9x7mm
|
Acceptable
|
|
GTEX-UTHO
|
61-70
|
Male
|
GTEX-UTHO-0226 |
Artery - tibial
|
PAXgene |
2
|
2 pieces, 3x2 & 4x2mm; extensive medial calcification
|
Acceptable
|
|
GTEX-UTHO
|
61-70
|
Male
|
GTEX-UTHO-0526 |
Testis
|
PAXgene |
2
|
2 pieces, 7x6 & 6x6mm; spermatogenesis; focal tubular and interstitial fibrosis
|
Acceptable
|
|
GTEX-UTHO
|
61-70
|
Male
|
GTEX-UTHO-1326 |
Heart
|
PAXgene |
2
|
2 pieces, 8.5x7 & 8.5x6mm;
|
Acceptable
|
|
GTEX-UTHO
|
61-70
|
Male
|
GTEX-UTHO-1426 |
Aorta
|
PAXgene |
2
|
6 pieces, up to 8x3mm; calcified plaques
|
Acceptable
|
|
GTEX-UTHO
|
61-70
|
Male
|
GTEX-UTHO-1526 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces, up to 6x1.5mm; partly sloughed epithelium
|
Acceptable
|
|
GTEX-UTHO
|
61-70
|
Male
|
GTEX-UTHO-1726 |
Adrenal glands
|
PAXgene |
2
|
2 pieces, 18x7 & 17x5.5mm;
|
Acceptable
|
|
GTEX-UTHO
|
61-70
|
Male
|
GTEX-UTHO-1926 |
Spleen
|
PAXgene |
2
|
2 pieces, 7x7 & 7x6.5mm; moderately congested
|
Acceptable
|
|
GTEX-UTHO
|
61-70
|
Male
|
GTEX-UTHO-2126 |
Stomach
|
PAXgene |
2
|
6 pieces, up to 8x2mm;
|
Acceptable
|
|
GTEX-UTHO
|
61-70
|
Male
|
GTEX-UTHO-2226 |
Pancreas
|
PAXgene |
2
|
2 pieces, 8x6 & 8.5x7mm; patchy interstitial fibrosis; <10% adipose within parenchyma
|
Acceptable
|
|
GTEX-UTHO
|
61-70
|
Male
|
GTEX-UTHO-2326 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, up to 7x2mm; patchy interstitial fibrosis
|
Acceptable
|
|
GTEX-UTHO
|
61-70
|
Male
|
GTEX-UTHO-2426 |
Liver
|
PAXgene |
2
|
2 pieces, 8x7.5 & 7x7mm; moderate congestion; some portal fibrosis
|
Acceptable
|
|
GTEX-UTHO
|
61-70
|
Male
|
GTEX-UTHO-2526 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, up to 8x2mm; mucosa moderately autolyzed
|
Acceptable
|
|
GTEX-UTHO
|
61-70
|
Male
|
GTEX-UTHO-2626 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 6x1mm; muscularis moderately autolyzed; totally autolyzed mucosa present
|
Acceptable
|
|
GTEX-UTHO
|
61-70
|
Male
|
GTEX-UTHO-2726 |
Prostate
|
PAXgene |
2
|
2 pieces, 8x6 & 8x8mm; glands largely autolyzed; muscle appears preserved
|
Acceptable
|
|