GTEX-1AX8Z
|
51-60
|
Male
|
GTEX-1AX8Z-2526 |
Ileum
|
PAXgene |
1
|
6 pieces; abundant lymphoid tissue, but muscularis propria present on all
|
Acceptable
|
 |
GTEX-1AX9I
|
61-70
|
Male
|
GTEX-1AX9I-2826 |
Ileum
|
PAXgene |
2
|
6 pieces; well dissected lymphoid tissue, but autolysis and admixture with adjacent muscle limit usefulness
|
Acceptable
|
 |
GTEX-1AX9J
|
61-70
|
Male
|
GTEX-1AX9J-2426 |
Ileum
|
PAXgene |
1
|
6 pieces, not ileum, colonic mucosa, unknown origin
|
Unacceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-1426 |
Ileum
|
PAXgene |
1
|
6 pieces; 3 pieces have very good lymphoid tissue; all have muscularis propria; 3 have no mucosa; LCM
|
Unacceptable
|
 |
GTEX-1AYCT
|
51-60
|
Male
|
GTEX-1AYCT-1726 |
Ileum
|
PAXgene |
2
|
6 pieces; mucosa and muscularis of colon
|
Unacceptable
|
 |
GTEX-1AYD5
|
51-60
|
Male
|
GTEX-1AYD5-1526 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa and scattered residual lymphoid aggregates in 4 of 6 pieces (rep. outlined); muscularis (not target) well preserved
|
Unacceptable
|
 |
GTEX-1B8KE
|
41-50
|
Male
|
GTEX-1B8KE-1726 |
Ileum
|
PAXgene |
1
|
6 pieces, well-preserved mucosa, target lymphoid aggregates are ~30% tissue, rep. delineated
|
Acceptable
|
 |
GTEX-1B8KZ
|
51-60
|
Male
|
GTEX-1B8KZ-1126 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa and lymphoid aggregates in 4 of 6 samples (arrows)
|
Acceptable
|
 |
GTEX-1B8L1
|
61-70
|
Male
|
GTEX-1B8L1-1726 |
Ileum
|
PAXgene |
3
|
6 pieces, mucosa sloughed, no target lymphoid aggregates
|
Unacceptable
|
 |
GTEX-1B8SF
|
61-70
|
Male
|
GTEX-1B8SF-2026 |
Ileum
|
PAXgene |
2
|
6 pieces; muscularis and autolyzed mucosa with some residual target lymphoid aggregates
|
Unacceptable
|
 |
GTEX-1B932
|
41-50
|
Female
|
GTEX-1B932-2226 |
Ileum
|
PAXgene |
2
|
6 pieces; full thickness sections with abundant lymphoid tissue (muscularis not target)
|
Unacceptable
|
 |
GTEX-1B933
|
51-60
|
Female
|
GTEX-1B933-2626 |
Ileum
|
PAXgene |
3
|
6 pieces, target lymphoid aggregates are ~20% tissue, rep delineated
|
Acceptable
|
 |
GTEX-1B97I
|
41-50
|
Male
|
GTEX-1B97I-1326 |
Ileum
|
PAXgene |
3
|
6 pieces, only trace target lymphoid aggregates
|
Unacceptable
|
 |
GTEX-1B98T
|
61-70
|
Male
|
GTEX-1B98T-2726 |
Ileum
|
PAXgene |
2
|
6 pieces, advanced glandular autolysis with prominent residual target lymphoid aggregatess, ~40% of tissue
|
Acceptable
|
 |
GTEX-1B996
|
61-70
|
Male
|
GTEX-1B996-2526 |
Ileum
|
PAXgene |
2
|
6 pieces; lymphoid infiltrate with numerous well defined follicles and reactive germinal centers c/w florid follicular hyperplasia
|
Acceptable
|
 |
GTEX-1BAJH
|
61-70
|
Male
|
GTEX-1BAJH-2526 |
Ileum
|
PAXgene |
2
|
5 pieces; abundant mucosal lymphoid tissue and autolyzed mucosa
|
Acceptable
|
 |
GTEX-1C2JI
|
51-60
|
Male
|
GTEX-1C2JI-1526 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa and abundant muscularis (not target) with only focal/minimal lymphoid tissue
|
Unacceptable
|
 |
GTEX-1C475
|
41-50
|
Female
|
GTEX-1C475-1426 |
Ileum
|
PAXgene |
1
|
6 pieces; 3 of 6 have good lymphoid component, 1 piece includes small portion of muscularis
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-2426 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa and too few (mostly autolyzed) lymphoid aggregates to warrant analysis (outlined), muscularis is also present (not target)
|
Unacceptable
|
 |
GTEX-1C64O
|
61-70
|
Male
|
GTEX-1C64O-2526 |
Ileum
|
PAXgene |
2
|
6 pieces, ~30% target lymphoid aggregates, rep delineated;glandular elements of mucosa largely autolyzed
|
Acceptable
|
 |
GTEX-1C6VQ
|
51-60
|
Male
|
GTEX-1C6VQ-2826 |
Ileum
|
PAXgene |
3
|
4 pieces; autolyzed mucosa with minimal residual lymphoid tissue
|
Unacceptable
|
 |
GTEX-1C6VR
|
61-70
|
Male
|
GTEX-1C6VR-1826 |
Ileum
|
PAXgene |
3
|
6 pieces, mucosa autolyzed; target lymphoid aggregates less than 5% of tissue
|
Unacceptable
|
 |
GTEX-1C6VS
|
61-70
|
Male
|
GTEX-1C6VS-2826 |
Ileum
|
PAXgene |
2
|
6 pieces; totally autolyzed mucosa and abundance of moderately autolyzed mucosal lymphoid tissue; focally muscularis present, not target (arrows)
|
Acceptable
|
 |
GTEX-1C6WA
|
61-70
|
Male
|
GTEX-1C6WA-2826 |
Ileum
|
PAXgene |
2
|
4 pieces; abundant but moderately autolyzed lymphoid tissue; muscle in 2 of 4
|
Acceptable
|
 |
GTEX-1CAMQ
|
41-50
|
Male
|
GTEX-1CAMQ-1826 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa and a few scattered residual lymphoid aggregates (outlined) representing ~5% of tissue, too few to warrant analysis except for LCM
|
Unacceptable
|
 |