GTEX-13FTW
|
41-50
|
Male
|
GTEX-13FTW-0726 |
Aorta
|
PAXgene |
1
|
6 pieces
|
Acceptable
|
 |
GTEX-13FTW
|
41-50
|
Male
|
GTEX-13FTW-0826 |
Atrial appendage
|
PAXgene |
0
|
2 pieces; 30-40% is fat/nerve/ganglion cells
|
Acceptable
|
 |
GTEX-13FTW
|
41-50
|
Male
|
GTEX-13FTW-0926 |
Coronary artery
|
PAXgene |
0
|
2 pieces; calcific atherosclerosis with profound luminal narrowing
|
Acceptable
|
 |
GTEX-13FTW
|
41-50
|
Male
|
GTEX-13FTW-1026 |
Heart
|
PAXgene |
0
|
2 pieces
|
Acceptable
|
 |
GTEX-13FTW
|
41-50
|
Male
|
GTEX-13FTW-1126 |
Liver
|
PAXgene |
1
|
2 pieces; severe microvescicular and macrovesicular (predominant) steatosis, mild fibrosis
|
Acceptable
|
 |
GTEX-13FTW
|
41-50
|
Male
|
GTEX-13FTW-1226 |
Prostate
|
PAXgene |
1
|
2 pieces; stromal and glandular hyperplasia, some atrophy, focal chronic prostatitits, transitional metaplasia
|
Acceptable
|
 |
GTEX-13FTW
|
41-50
|
Male
|
GTEX-13FTW-1326 |
Testis
|
PAXgene |
1
|
2 pieces; spermatogenesis is present
|
Acceptable
|
 |
GTEX-13FTW
|
41-50
|
Male
|
GTEX-13FTW-1426 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces; predominantly fat with 5-15% fibrous tissue, no ductal elements seen
|
Acceptable
|
 |
GTEX-13FTW
|
41-50
|
Male
|
GTEX-13FTW-1526 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces; well trimmed
|
Acceptable
|
 |
GTEX-13FTW
|
41-50
|
Male
|
GTEX-13FTW-1626 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces; eosinophilic squamous surface may indicate significant alcohol ingestion
|
Acceptable
|
 |
GTEX-13FTW
|
41-50
|
Male
|
GTEX-13FTW-1726 |
Stomach
|
PAXgene |
1
|
6 pieces; mucosa and submucosa, well preserved
|
Acceptable
|
 |
GTEX-13FTW
|
41-50
|
Male
|
GTEX-13FTW-1826 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; predominantly mucosa/submucosa, 2 with small portion of muscularis
|
Acceptable
|
 |
GTEX-13FTW
|
41-50
|
Male
|
GTEX-13FTW-1926 |
Gastroesophageal junction
|
PAXgene |
0
|
6 pieces; well trimmed
|
Acceptable
|
 |
GTEX-13FTW
|
41-50
|
Male
|
GTEX-13FTW-2026 |
Ileum
|
PAXgene |
1
|
6 pieces; mucosa/submucosa with pronounced lymphoid component in 3 of 6
|
Acceptable
|
 |
GTEX-13FTW
|
41-50
|
Male
|
GTEX-13FTW-2126 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; muscularis and residual submucosa
|
Acceptable
|
 |
GTEX-13FTW
|
41-50
|
Male
|
GTEX-13FTW-2226 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; intimal thickening and early atherosclerosis
|
Acceptable
|
 |
GTEX-13FTW
|
41-50
|
Male
|
GTEX-13FTW-2326 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; 5-10% is internal fat/vessels/nerve
|
Acceptable
|
 |
GTEX-13FTW
|
41-50
|
Male
|
GTEX-13FTW-2426 |
Nerve - tibial
|
PAXgene |
1
|
3 pieces; includes up to 40-50% internal and attached fat
|
Acceptable
|
 |
GTEX-13FTW
|
41-50
|
Male
|
GTEX-13FTW-2526 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; incomplete sections (?poor fixation), tissue present is oversized at 20mm
|
Acceptable
|
 |
GTEX-13FTW
|
41-50
|
Male
|
GTEX-13FTW-2626 |
Skin, leg
|
PAXgene |
1
|
2 pieces; original image 53397 is pituitary, NOT SKIN; recut of block reveals skin (image 53794) with up to 10% attached and internal fat, epidermis measures 42 microns
|
Acceptable
|
 |
GTEX-13FTX
|
21-40
|
Female
|
GTEX-13FTX-0126 |
Spleen
|
PAXgene |
0
|
2 pieces; capsule is present (target is 5mm below capsule), congestion, diminished white pulp
|
Acceptable
|
 |
GTEX-13FTX
|
21-40
|
Female
|
GTEX-13FTX-0226 |
Aorta
|
PAXgene |
0
|
6 pieces; includes small detached contaminating fragments of spleen
|
Acceptable
|
 |
GTEX-13FTX
|
21-40
|
Female
|
GTEX-13FTX-0326 |
Lung
|
PAXgene |
0
|
2 pieces; pleura is present (target is 1cm below pleura), some atelectasis
|
Acceptable
|
 |
GTEX-13FTX
|
21-40
|
Female
|
GTEX-13FTX-0426 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces; 5 of 6 include muscularis, but ~50% of each is residual fat, vessels and significant component of nerve, one piece is entirely fat/incidental lymph node/vessels
|
Unacceptable
|
 |
GTEX-13FTX
|
21-40
|
Female
|
GTEX-13FTX-0526 |
Esophagus - mucosa
|
PAXgene |
0
|
4 pieces
|
Acceptable
|
 |