GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-1026 |
Pancreas
|
PAXgene |
1
|
2 pieces; 1 piece has 30% external fat; other has 30% large blood vessels & fat
|
Acceptable
|
|
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-1126 |
Prostate
|
PAXgene |
1
|
2 pieces; more stroma than glands: 70:30
|
Acceptable
|
|
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-1226 |
Testis
|
PAXgene |
1
|
2 pieces; greatly reduced mature spermatogenesis
|
Acceptable
|
|
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-1326 |
Omentum
|
PAXgene |
1
|
2 pieces; 10% vascular content
|
Acceptable
|
|
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-1426 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; all have 10% interstitial fibrous content
|
Acceptable
|
|
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-1526 |
Esophagus - mucosa
|
PAXgene |
0
|
2 pieces; muscularis propria makes up 20 to 30% in 4 of 6 pieces [labeled]; large submucosal gland comprises 10% of 1 piece, 5% of another piece [labeled]
|
Acceptable
|
|
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-1626 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; 2 pieces are pure muscularis, 4 have 100%, 80%, 70% & 20% submucosal stroma; 1 has 1 mm squamous carry-over
|
Acceptable
|
|
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-1726 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; 3 pieces have mucosa as well as muscularis; foci of edematous, amyloid-like stroma or fibroelastosis in submucosa of 3 pieces [circled] (as in transverse colon)
|
Acceptable
|
|
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-1826 |
Stomach
|
PAXgene |
1
|
6 pieces; full thickness specimens; microcystic glandular change [outlined]
|
Acceptable
|
|
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-1926 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; foci of edematous, amyloid-like stroma or fibroelastosis in submucosa of 2 pieces, measuring up to 3x1mm, [labeled] like in sigmoid colon; no sign of amyloid in other tissues
|
Acceptable
|
|
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-2026 |
Ileum
|
PAXgene |
1
|
6 pieces; all have muscularis and fat, no mucosa or lymphoid tissue
|
Unacceptable
|
|
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-2126 |
Mammary tissue (breast)
|
PAXgene |
2
|
2 pieces; dense fibrous stroma and ductal proliferation consistent with gynecomastia, especially in 1 piece
|
Acceptable
|
|
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-2226 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; well trimmed; contains several hair follicles
|
Acceptable
|
|
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-2326 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; moderately to severely atrophic, fibrotic glands with ductal dilatation
|
Acceptable
|
|
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-2426 |
Skin, leg
|
PAXgene |
1
|
6 pieces; well trimmed
|
Acceptable
|
|
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-2526 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; 10% vascular content
|
Acceptable
|
|
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-2626 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; foci of atrophy some with lymphoid aggregates; 10 & 20% internal fibrovascular fatty content
|
Acceptable
|
|
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-2726 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; 30 and 60% fibrofatty content
|
Acceptable
|
|
GTEX-1F5PK
|
51-60
|
Male
|
GTEX-1F5PK-2826 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; severely sclerotic, calcified, ossified plaques; 1 with 60% extraneous fibrofatty tissue
|
Acceptable
|
|
GTEX-1F6I4
|
51-60
|
Male
|
GTEX-1F6I4-0126 |
Skin, leg
|
PAXgene |
1
|
6 pieces; well trimmed with minimal internal fat, epidermis measures about 30 microns
|
Acceptable
|
|
GTEX-1F6I4
|
51-60
|
Male
|
GTEX-1F6I4-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces; one has large central defect (?fixation)
|
Acceptable
|
|
GTEX-1F6I4
|
51-60
|
Male
|
GTEX-1F6I4-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces
|
Acceptable
|
|
GTEX-1F6I4
|
51-60
|
Male
|
GTEX-1F6I4-0426 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; includes from 5-25% attached fat/skeletal muscle
|
Acceptable
|
|
GTEX-1F6I4
|
51-60
|
Male
|
GTEX-1F6I4-0526 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; some sclerosis, attachment of vessels
|
Acceptable
|
|
GTEX-1F6I4
|
51-60
|
Male
|
GTEX-1F6I4-0626 |
Coronary artery
|
PAXgene |
1
|
2 pieces; atherosclerosis, attachment of fat/nerve
|
Acceptable
|
|