GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-2526 |
Brain - cerebellum
|
PAXgene |
2
|
4 pieces, ~4x3mm
|
Acceptable
|
|
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-2726 |
Pituitary gland
|
PAXgene |
2
|
1 aliquot; ~5x4mm adenohypophysis ensquared, attached ~1.5x1.5mm neurohypophysis fragment, encircled. Connecting band of fibrous tissue
|
Acceptable
|
|
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-1126 |
Urinary bladder
|
PAXgene |
2
|
6 pieces up to 10x5 mm; 3 have partially sloughed epithelium; 3 have only muscular wall
|
Acceptable
|
|
GTEX-S95S
|
51-60
|
Male
|
GTEX-S95S-0526 |
Spleen
|
PAXgene |
2
|
2 aliquots, ~9X6mm
|
Acceptable
|
|
GTEX-S95S
|
51-60
|
Male
|
GTEX-S95S-0626 |
Urinary bladder
|
PAXgene |
2
|
4 pieces, ~6x4mm, no visible urothelium; LDCC NOTE: 2 are ~50% fat, encircled
|
Acceptable
|
|
GTEX-SIU7
|
51-60
|
Male
|
GTEX-SIU7-0626 |
Kidney - medulla
|
PAXgene |
2
|
6 pieces up to 10x6 mm; 3 are pure medulla, 3 are mixed medulla and cortex; cortex shows severe vascular lesions as in 0725; label medulla, consider it mixed
|
Acceptable
|
|
GTEX-SIU7
|
51-60
|
Male
|
GTEX-SIU7-0726 |
Kidney - cortex
|
PAXgene |
2
|
2 pieces 10x8 & 9x8 mm; cortex in both, 20% medulla in one; severe glomerular and vascular sclerosis; no normal glomeruli present; relabel as cortex
|
Acceptable
|
|
GTEX-SIU8
|
51-60
|
Male
|
GTEX-SIU8-0926 |
Lung
|
PAXgene |
2
|
2 pieces ~8x7mm, moderate congestion
|
Acceptable
|
|
GTEX-SIU8
|
51-60
|
Male
|
GTEX-SIU8-1226 |
Liver
|
PAXgene |
2
|
2 pieces ~8x7mm, diffuse macro and micro vesicular steatosis
|
Acceptable
|
|
GTEX-SIU8
|
51-60
|
Male
|
GTEX-SIU8-1426 |
Pancreas
|
PAXgene |
2
|
2 pieces ~8x7mm. Islets more badly autolyzed; a few encircled.
|
Acceptable
|
|
GTEX-SIU8
|
51-60
|
Male
|
GTEX-SIU8-1626 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces ~7x2.5mm
|
Acceptable
|
|
GTEX-SJXC
|
61-70
|
Male
|
GTEX-SJXC-1226 |
Liver
|
PAXgene |
2
|
2 pieces ~10x8mm. Moderate congestion, moderately autolyzed
|
Acceptable
|
|
GTEX-SJXC
|
61-70
|
Male
|
GTEX-SJXC-1526 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces ~6x3mm
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-0926 |
Lung
|
PAXgene |
2
|
2 pieces, ~7x5mm. Minimal congestion
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-1026 |
Liver
|
PAXgene |
2
|
2 pieces, ~7x7mm
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-1326 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces ~5x1.5mm. Squamous mucosa sloughing, ~1% of thickness where present
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-1626 |
Mammary tissue (breast)
|
PAXgene |
2
|
2 pieces ~8x5mm. Minute foci of atrophic TLDUs in one aliquot, encircled, mucosa poorly preserved
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-2126 |
Cervix - ectocervix
|
PAXgene |
2
|
4 pieces ~5x4mm, prominent Nabothian cysts noted
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-2226 |
Cervix - endocervix
|
PAXgene |
2
|
4 pieces ~5x4mm, no mucosa visible
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-2626 |
Vagina
|
PAXgene |
2
|
6 pieces ~9x3mm. Squamous mucosa nearly completely sloughed
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-2826 |
Stomach
|
PAXgene |
2
|
6 pieces ~8x3mm. Mucosa up to ~50% of thickness, badly autolyzed in most aliquots
|
Acceptable
|
|
GTEX-SNMC
|
21-40
|
Male
|
GTEX-SNMC-0826 |
Urinary bladder
|
PAXgene |
2
|
6 pieces up to 8x4 mm; mucosa is variably preserved: some areas well and some sloughed
|
Acceptable
|
|
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1226 |
Urinary bladder
|
PAXgene |
2
|
6 pieces up to 8x5mm; little epithelium, what is present is largely sloughed; lots of tissue fractures
|
Acceptable
|
|
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-1326 |
Spleen
|
PAXgene |
2
|
2 pieces ~8x6mm
|
Acceptable
|
|
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-1726 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces ~6x3mm, tubules autolyzed
|
Acceptable
|
|