GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-1926 |
Minor salivary glands
|
PAXgene |
1
|
1 piece, 7x3mm; well dissected, well preserved; 10% intraglandular adipose
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-2026 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces, up to 10x4mm; too much subcutaneous adipose (up to 1 mm)
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-2126 |
Skin, leg
|
PAXgene |
1
|
6 pieces, up to 8x4.5mm; too much subcutaneous adipose (up to 1.5 mm)
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-2226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, 9x9 & 7x7mm; minimal artifacts
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-2326 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces, 10x10 & 11x8mm; minimal external adipose
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-2426 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, 4x3 & 5x3mm; minimal external adipose
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-2526 |
Artery - tibial
|
PAXgene |
1
|
2 pieces, 3x2 & 4x4mm; intimal fibrosis 0.2 mm; minimal external adipose
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-2626 |
Testis
|
PAXgene |
1
|
2 pieces, 11x9 & 13x9mm; adequate spermatogenesis; focal tubular atrophy/fibrosis up to 3x1mm c/w microinfarcts;
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-2726 |
Liver
|
PAXgene |
1
|
2 pieces, 11x9 & 12x9mm; giant cell granulomas (history of sarcoid); capsule present up to 0.4mm thick, specimen should be sampled below capsule
|
Acceptable
|
 |
GTEX-X5EB
|
41-50
|
Male
|
GTEX-X5EB-0126 |
Spleen
|
PAXgene |
1
|
2 pieces, 8x4 & 8x7mm; mild congestion
|
Acceptable
|
 |
GTEX-X5EB
|
41-50
|
Male
|
GTEX-X5EB-0226 |
Aorta
|
PAXgene |
1
|
6 pieces, up to 9x3mm;
|
Acceptable
|
 |
GTEX-X5EB
|
41-50
|
Male
|
GTEX-X5EB-0326 |
Coronary artery
|
PAXgene |
1
|
2 pieces, 4x2 & 5x4mm; one with nearly total atherosclerotic occlusion, delineated, the other with ~30% occlusion
|
Acceptable
|
 |
GTEX-X5EB
|
41-50
|
Male
|
GTEX-X5EB-0426 |
Lung
|
PAXgene |
1
|
2 pieces, 8.5x6.5 & 7.5x4mm; congested but well preserved
|
Acceptable
|
 |
GTEX-X5EB
|
41-50
|
Male
|
GTEX-X5EB-0526 |
Pancreas
|
PAXgene |
1
|
2 pieces, 11x9 & 10x8mm; well preserved, Islets rare but well seen, delineated, adherent fat ~10% of specimen, rep areas delineated
|
Acceptable
|
 |
GTEX-X5EB
|
41-50
|
Male
|
GTEX-X5EB-0626 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, 9x7 & 11x8mm; layer of adherent fat delineated, ~0.5mm
|
Acceptable
|
 |
GTEX-X5EB
|
41-50
|
Male
|
GTEX-X5EB-0726 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, 9x6.5 & 9x8mm; interstitial fibrosis
|
Acceptable
|
 |
GTEX-X5EB
|
41-50
|
Male
|
GTEX-X5EB-0826 |
Heart
|
PAXgene |
1
|
2 pieces, 12x7 & 11x10mm; markedly hemorrhagic, acute/ subacute infarct
|
Acceptable
|
 |
GTEX-X5EB
|
41-50
|
Male
|
GTEX-X5EB-0926 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, up to 12x5mm; ~10-20% thickness is mucosa, reasonably well preserved
|
Acceptable
|
 |
GTEX-X5EB
|
41-50
|
Male
|
GTEX-X5EB-1026 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, up to 9.5x5mm; all muscularis; good specimens
|
Acceptable
|
 |
GTEX-X5EB
|
41-50
|
Male
|
GTEX-X5EB-1126 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 9x4mm; ~60% muscularis, rep. area delineated; rest is fat and mucosa
|
Acceptable
|
 |
GTEX-X5EB
|
41-50
|
Male
|
GTEX-X5EB-1226 |
Stomach
|
PAXgene |
1
|
6 pieces, up to 11x5mm; mucosa is well preserved, ~25% of thickness, rep layer delineated
|
Acceptable
|
 |
GTEX-X5EB
|
41-50
|
Male
|
GTEX-X5EB-1326 |
Omentum
|
PAXgene |
1
|
2 pieces, 9x7 & 10x9mm;
|
Acceptable
|
 |
GTEX-X5EB
|
41-50
|
Male
|
GTEX-X5EB-1426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, up to 9x4mm; all muscularis; good specimens
|
Acceptable
|
 |
GTEX-X5EB
|
41-50
|
Male
|
GTEX-X5EB-1526 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces, up to 4.5x4mm; squamous mucosa is ~10-20% thickness
|
Acceptable
|
 |
GTEX-X5EB
|
41-50
|
Male
|
GTEX-X5EB-1626 |
Ileum
|
PAXgene |
1
|
6 pieces, up to 7x4mm; ~5-10% lympohid elements, rest is mucosa and muscularis, well preserved
|
Acceptable
|
 |